Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0540 ATGGGGAAGGGATTCGTTCCGATGAAGGCGGTGACCTACGGCCTCTCACCTTTCCAGCAGAAGATCATGCCTGGTCTATGGAAGGACCTGCCTACCAAGATCCACCACAAGGTCTCCGAGAACTGGATCAGCGCCACCCTCCTCCTCGGTCCCCTCGTCGGAGTCTACTCGTATGTTCAGAACTACCAGGAAAAGGAGAAGTTGTCCCACAGATATTGA 219 0.5434 MGKGFVPMKAVTYGLSPFQQKIMPGLWKDLPTKIHHKVSENWISATLLLGPLVGVYSYVQNYQEKEKLSHRY* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0540 72 Pfam Cytochrome b-c1 complex subunit 8 1 72 IPR020101 GO:0005750|GO:0070469
Ahy1g0540 72 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 8 1 72 IPR020101 GO:0005750|GO:0070469
Ahy1g0540 72 PANTHER CYTOCHROME B-C1 COMPLEX, SUBUNIT 8 1 72 - -
Ahy1g0540 72 Gene3D - 5 72 IPR036642 GO:0005750|GO:0006122
Ahy1g0540 72 SUPERFAMILY Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 10 65 IPR036642 GO:0005750|GO:0006122
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0540 Ahy-Chr1 8407057 8409138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0540 1 72 Chloroplast and Mitochondria Gene Families AT5G05370 70.833 2.16e-34 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0540 - - gmx:100500582 135.961