LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy1g0536	ATGTATCTTTCAAAGGGTTGCAAGCATCAAGTTCTTTTCATCTTGTGGTTCTGCTGCTACTTGCTACATGTTTCGGCGGAGAATAATATCACTGACCCTGTTGAAGTTGAAGCATTGAATGCCATAAAGCAAAGATTGAATGACCCTAATGGAAATTTGAGCAACTGGGGACATAATGATCCGTGTACATCGAAGTGGACAGGAGTTTTGTGCTACAATGAAACATTGGATGATGGATATCTACATGTTCAAGAACTGCAATTACTGAGTTTAAACCTGACAGGAAATTTGGCACCCGAGCTCGGCAACTTAACCCGTTTGTTAAGATTGAACTTTATGTGGAACAAGATAACTGGGAGTATTCCGAAGGAAATCGGTGAAATCAAAACTTTGCAACTCTTGCTTCTGAATGGAAACAACTTAACTGGTCCACTACCAGATGAGCTCGGCTATCTTCCGAATTTGGATAGGATACAAATTGATCAGAACAATATATCAGGGCCCGTACCTAAATCATTTGCAAACCTGAACAAGACAAAGCACTTCCACATGAACAATAATTCACTTAGCGGACAAATCCCACCGGAGCTTTCCCGGTTGCCAAGTCTTGTTCATCTTCTTCTTGATAACAACAAATTAACAGGATATCTTCCGAGTGACCTCTACAAGTTGCCAAACTTACTTATAATTCAACTTGATAACAATAACTTTGAGGGAAATACTATTCCAAGTTCTTATGGCAACATGTCAAAACTGCTGAAAATGAGTCTTAGGAATTGCAACTTGAGAGGACCAGTTCCTGATTTAAGCAGGATACCCCACCTTCTTTATCTAGACCTCAGTTCCAATCAGTTGAATGGATCAATTCCTAGCAACAAGCTTTCCAACAACATCACAACCATTGATTTATCGAACAACAAGCTTACTGGAACTATTCCATCCTACTTTTCTAGTCTTCCTGTTCTTCAAAGATTGTCACTTGAAAACAATTTATTGAAAGGCAGTGTTTCTTCCACCATTTGGCAGAACAAGACTTTGAATGGCAAAAAATTTATCTTGGAGTTGCAAAACAATAGCCTTACAAGCATATCAGGCACTAGTGATATTCCTCCAAATGTCACACTCTCGCTCAATGGGAATCCTCTATGCTCAAATAATAAGTCCTTGGTTCAATTCTGTGGATCTGAGACTGCTGACAATAACACAAATGGCATTGTTTCAACAAATTCCAGCTCATGCCCTGCTCAAGCGTGCCCTCCTCCTTTCGAATATTCCTTCGACTGTTTCTGTGCAGCACCATTGCTTGTCAGTTATCGACTGAAAAGTCCTGGATTTTCGGATTTTCGACCATACGTGCTTTCCTTTCAGGAATACCTGAGTACAGGTCTTAGTATACAGATGGATCAGCTTCAATTTAGTTTTTATTGGCAAGCCGGACCTCGGTTGAGAATGGACTTGAAGCTTTTTCCAGTTTATGTTGGTAACAGCAGCTCTCATATTTTCAATACAACCGAGCTCCTACGGCTCATGACCATGTTCACTGGATGGCACATTCAAGACAGTGATTTGTTTGGACCTTATGAGTTACTTGGCTTCAATCTCCTTGATCCTTACAAGGGTGTGGTCATCCCCAAGTCTTCAAATTCAAAGATAAGTACAGGTGCTTTGGCTGGCATAATCTTAGGATCAATTGCCTGCGCCGTGACGTTATCTGCAATAGTTACCCTCCTTATATTAAGAGTGAAGTTGAAAGATCATCCTGTAGTTTCGAAGCGACGTCATTCATCTAAGATCTCAATAAAAATTGATGGTGTAAGGGCCTTCACTTTTGGAGAATTGTCTGCTGCTACCAACAATTTTAGCAACTCTTCTCAAGTAGGACAAGGAGGTTATGGCAAGGTTTACAAAGGTATTCTTTCTGATGGCACCGTTGTTGCCATTAAACGTGCGCAGGAGGGGTCGCTGCAAGGTGAGAAAGAGTTCCTCACAGAAATATCATTACTTTCGAGGCTACATCATCGCAACCTTGTGTCTCTCCTTGGATACTGTGATGAAGAGGGTGAACAGATGCTGGTTTATGAATTCATGCCAAATGGTACACTAAGGGAACACATTTCAGTTACAGCAAAAGAGCCTCTGAGTTTCGCCATGAGATTGAAGATTGCACTAGGGTCAGCAAAGGGTCTTATGTATTTACACACTGAAGCTGATCCTCCAATATTCCACAGAGATGTTAAAGCCAGCAACATATTATTGGACTCTAAGTTCACAGCAAAAGTGGCTGATTTCGGACTTTCGCGGCTCGCTCCAGTTCCTGATCTTGAAGGAGTTGTCCCTGGCCATGTATCCACAGTGGTAAAGGGAACCCCGGGTTATCTTGATCCAGAGTACTTCCTAACTCACAAGTTGACTGATAAAAGCGATGTTTATAGTCTTGGGGTTGTGTTTCTGGAACTTTTGACTGGGATGCAACCAATCTCACATGGCAAGAACATTGTTAGAGAGGTTAATGTTGCGTATCAATCTGGCGTAATATTTTCGATCATTGATGATCGCATGGGGTCCTATCCATCTGAGCATGTAGAGAAATTCTTGACCTTGGCCCTGAAGTGTTGCGAAGACGAGCCAGAAGCCCGGCCTAAAATGGCAGAGGTGGTTAGGGAGCTTGAAAACATATGGTCCATGATGCCAGAATCAGATACTCGGAGAGCCGAATCGATAACCAGTGATTCAGGAAAGTTAAGTACAAGTACACCATCTTCATCCTCTGCTATAAAGACTCCTTTTGTATCAGGAGATGTTTCAGGTAGTGACCTTGTTAGTGGAGTAATACCAAGCATCAAGCCAAGATAG	2853	0.4175	MYLSKGCKHQVLFILWFCCYLLHVSAENNITDPVEVEALNAIKQRLNDPNGNLSNWGHNDPCTSKWTGVLCYNETLDDGYLHVQELQLLSLNLTGNLAPELGNLTRLLRLNFMWNKITGSIPKEIGEIKTLQLLLLNGNNLTGPLPDELGYLPNLDRIQIDQNNISGPVPKSFANLNKTKHFHMNNNSLSGQIPPELSRLPSLVHLLLDNNKLTGYLPSDLYKLPNLLIIQLDNNNFEGNTIPSSYGNMSKLLKMSLRNCNLRGPVPDLSRIPHLLYLDLSSNQLNGSIPSNKLSNNITTIDLSNNKLTGTIPSYFSSLPVLQRLSLENNLLKGSVSSTIWQNKTLNGKKFILELQNNSLTSISGTSDIPPNVTLSLNGNPLCSNNKSLVQFCGSETADNNTNGIVSTNSSSCPAQACPPPFEYSFDCFCAAPLLVSYRLKSPGFSDFRPYVLSFQEYLSTGLSIQMDQLQFSFYWQAGPRLRMDLKLFPVYVGNSSSHIFNTTELLRLMTMFTGWHIQDSDLFGPYELLGFNLLDPYKGVVIPKSSNSKISTGALAGIILGSIACAVTLSAIVTLLILRVKLKDHPVVSKRRHSSKISIKIDGVRAFTFGELSAATNNFSNSSQVGQGGYGKVYKGILSDGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLLGYCDEEGEQMLVYEFMPNGTLREHISVTAKEPLSFAMRLKIALGSAKGLMYLHTEADPPIFHRDVKASNILLDSKFTAKVADFGLSRLAPVPDLEGVVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNVAYQSGVIFSIIDDRMGSYPSEHVEKFLTLALKCCEDEPEARPKMAEVVRELENIWSMMPESDTRRAESITSDSGKLSTSTPSSSSAIKTPFVSGDVSGSDLVSGVIPSIKPR*	951

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy1g0536	950	Gene3D	Ribonuclease Inhibitor	295	387	IPR032675	-
	Ahy1g0536	950	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	740	752	IPR008271	GO:0004672\|GO:0006468
	Ahy1g0536	950	ProSitePatterns	Protein kinases ATP-binding region signature.	626	648	IPR017441	GO:0005524
	Ahy1g0536	950	Gene3D	Phosphorylase Kinase; domain 1	584	695	-	-
	Ahy1g0536	950	SMART	serkin_6	620	894	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy1g0536	950	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	10	922	-	-
	Ahy1g0536	950	SUPERFAMILY	L domain-like	41	392	-	-
	Ahy1g0536	950	ProSiteProfiles	Protein kinase domain profile.	620	894	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy1g0536	950	CDD	STKc_IRAK	626	892	-	-
	Ahy1g0536	950	Pfam	Protein kinase domain	621	887	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy1g0536	950	SUPERFAMILY	Protein kinase-like (PK-like)	605	913	IPR011009	-
	Ahy1g0536	950	Gene3D	Ribonuclease Inhibitor	32	294	IPR032675	-
	Ahy1g0536	950	MobiDBLite	consensus disorder prediction	908	930	-	-
	Ahy1g0536	950	Gene3D	Transferase(Phosphotransferase) domain 1	696	913	-	-
	Ahy1g0536	950	PANTHER	LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN	10	922	-	-
	Ahy1g0536	950	MobiDBLite	consensus disorder prediction	899	950	-	-
	Ahy1g0536	950	Pfam	Leucine rich repeat	153	213	IPR001611	GO:0005515
	Ahy1g0536	950	Pfam	Leucine rich repeat N-terminal domain	35	71	IPR013210	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy1g0536	Ahy-Chr1	8364273	8372488	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy1g0536	18	902	Receptor kinase-like Gene Family	AT5G01950	58.797	0.0	981

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Ahy1g0536		Pkinase	3.10E-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy1g0536	-		-	gmx:100799888	1473.37