Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0528 ATGTCCGCACACTCCACCCTGAAGCTTCAGAATCTCGCAATAAGAAGCTCAAGCTTCGATTTTGAAGGCGACCCACCATGCAAAACAGCAAAAAGGCTTCGATCGAAGAAGCTCCTTCGAATCATACTCACCGATCCCGACGCCACCGATTCAGAATCTTCCAACGATGAAGCAGAGGAGCAAACCCCATCACCGAGGGTAAAAAGGGAAATTATCACTCACATAATGACCCCTCGGCTTCACTCTTCGCATTCTTCTTCTCCAACCGCATCTTCATCACCTTCTTCTCCTTCAATCGGTTCGGGTCAAAACCATGTTGACCGGAACCGGTTCAAGAGGAAAATAAAACGCACCATTTCTGGCTCTGGAAGGTTCCGTGGCGTTCGTCAGAGACCGTGGGGGCGGTGGACGGCAGAGATTCGTGACCCGAACCGAAGAAAACGGGTTTGGTTGGGCACTTTTGACACGGCGGAGGAGGCTGCCGCTGTTTACGACGCCGCGGCAGTTAAGTTCAAGGGTCCCGGCGCAGCTATTAACTTTCCTCGTGGCGATTCGGAAGTTTCCGGCGAGAGTTTTGCGGTGGTTTCCGGTGAGGGTTTTGTGGCGGTTTCTGGGAGCAGAGGGGGTTTTGCCTCTCCGACTTCGGTCCTTGCTTACGATGACGGCGTTGTTGGTGGTTGCGAGACGACGCCGTTTGAGGGTCTTCGTTACGGCGATGTGGATGCTTTCGGTTTTGACATTGACGTGCCGTTAAGTTTGATGGGCGTTAACTCGGTATTGACTCAGCGGTTTGGGAAGGAAGAGTTCGGCGAGTTAGACCCGGAAGATTTCATGACGTGGCCTGAATAG 849 0.5277 MSAHSTLKLQNLAIRSSSFDFEGDPPCKTAKRLRSKKLLRIILTDPDATDSESSNDEAEEQTPSPRVKREIITHIMTPRLHSSHSSSPTASSSPSSPSIGSGQNHVDRNRFKRKIKRTISGSGRFRGVRQRPWGRWTAEIRDPNRRKRVWLGTFDTAEEAAAVYDAAAVKFKGPGAAINFPRGDSEVSGESFAVVSGEGFVAVSGSRGGFASPTSVLAYDDGVVGGCETTPFEGLRYGDVDAFGFDIDVPLSLMGVNSVLTQRFGKEEFGELDPEDFMTWPE* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0528 282 Pfam AP2 domain 124 173 IPR001471 GO:0003700|GO:0006355
Ahy1g0528 282 ProSiteProfiles AP2/ERF domain profile. 124 181 IPR001471 GO:0003700|GO:0006355
Ahy1g0528 282 CDD AP2 124 181 IPR001471 GO:0003700|GO:0006355
Ahy1g0528 282 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Ahy1g0528 282 PRINTS Ethylene responsive element binding protein signature 147 163 IPR001471 GO:0003700|GO:0006355
Ahy1g0528 282 MobiDBLite consensus disorder prediction 78 105 - -
Ahy1g0528 282 MobiDBLite consensus disorder prediction 44 114 - -
Ahy1g0528 282 MobiDBLite consensus disorder prediction 59 75 - -
Ahy1g0528 282 PIRSF PTI6 7 282 IPR017392 GO:0003700
Ahy1g0528 282 SMART rav1_2 124 187 IPR001471 GO:0003700|GO:0006355
Ahy1g0528 282 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED 33 221 - -
Ahy1g0528 282 Gene3D AP2/ERF domain 123 182 IPR036955 GO:0003700|GO:0006355
Ahy1g0528 282 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 33 221 - -
Ahy1g0528 282 SUPERFAMILY DNA-binding domain 124 181 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0528 Ahy-Chr1 8246914 8247762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0528 35 223 AP2-EREBP Transcription Factor Family AT4G27950 44.279 7.08e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy1g0528 AP2 1.70E-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0528 K13434 - gmx:102660028 233.417