Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0517 ATGGGTTCCGACATTTGCGTCAATGGTTCTTGCTGCGTGCACGAATGGAAGAAGGGATGGCCTCTACGATCTGGTGGATTCGCCCAACTATGCATCAAGTGCGGATTTATGGAGGAATGGAAGCGTGAGATAATTGATACATTATCTGCAAATGAGTATTCACTATTCTGTAATAACTTCCACCGTCGCGAAACTGGATGGAAGGAGTGTAACTTTTGCAACAAGCCTATCCATTGTGGATGCATAGCATCTAAATCTTTGTTCGAGTACCTTGACTTTGGCGGTGTAGGATGTGTTAGCTGTGTAAATGCTTCCCAACTACGTTTGACGAGGAATACTGAAAATGGGTCTGTTTCGACTACCAAAAATAATGCAAGTGATCGGCATTCTGCGCATATTGACAACAGACAGTTTGTCAGTAGCGTGGATGAAGGAAAACTTATGGAGTTCTGCAGAATTGTTGAAGCTAGCGAATCAAGCCGTTGGAATCATGCTCAGAGAGACAACATAATCTCATGTAATGGGCAAAATGGCAAAGAAGTGACATTCAGGGAAGTGGAAAGTGGATTTTCAAATGTGATAAAGCCATCGGTTCAGTCATTAACGTTTTCTGCTTTAGAAAATAGTAGACCGACATGGGAAATTAAAAGTAGACATGAACCAATGACTCAACCATCTTTAAACATGTGTCTGGGAAATCCGTCTGGGAGCAACTTGGTACTGCCTTCAGCAACTGAGATTGCAGAAGGAAGACTTGAGAGCAAAGCCTCCAACTTTCAACAAAGATCTCGGCCCATATTGCCCAAACCATCAAAGACTGGACTTACAATGAATGTGGAAACAGACAAAGGCTCAACTTCTCAGGCACGCATTGCTCGACCACCTGCCGAGGGGAGGGGCAAAAACCAGTTGCTTCCTCGATACTGGCCCAGGATTACTGATCAAGAACTGGAGCGGTTGTCTGGAGATTTGAAGTCCACTGTAGTGCCGTTGTTTGAGAAGGTGTTGAGTGCTAGTGATGCTGGCCGAATTGGTCGACTTGTTCTCCCAAAAGCATGTGCCGAGGCTTATTTTCCTCATATTTCACAATCAGAAGGTCTTCCTTTACGGGTCCAAGACGTGAAGGGGAATGAATGGACATTTCAGTTCAGATTTTGGCCTAATAACAATAGTCGGATGTATGTATTGGAGGGTGTGACACCTTGCATACAGTCCATGCAATTACGTGCTGGTGATACGGTTACATTTAGTCGGATAGACCCTGGGGGTAAACTTGTTATGGGTTTCAGGAGGGCGACAAATTCTTCAGACACCCAGGATGCCTCTACATCTGCACAATCGAATGGCATTTCAACTACAGGAACCATCTCTGGTGGAACTGAGAATCTGCTATCAGGAAGTAATTATGCTGATCTTCTCCAGTCGGCGAAAGGGAATGGGGAACCTAATTCTAGTGGACATCCAGAACATCCACGTTCAGTTTCAGAGAAGAAGAGGACTCGCAATATTGGGCCTAAAAGTAAGAGGTTGCTCATTGATAATGAAGATTCTATGGAGTTGAGACTTACCTGGGAAGAAGCACAGGACTTGCTTCGTCCGCCACCTAGTGTTAAGCCAAGTATTGTCACCATTGAGGACCAAATATTTGAAGAATATGATGAGCCCCCGGTTTTCGGAAAGAGGACTATTTTCAGTGCCTGTTCATCTGGGGGGAAGGAGCAGTGGGCTCAATGTGATGATTGCTCTAAATGGCGAAAGCTTCCCGTCGATGCTCTTCTTCCTCCCAAGTGGAATTGCTCTGAGAATGTTTGGGATGCAAGCAGGGCTTCATGTTCTGCTCCAGAGGAGATGAGTTCAAGGGAATTAGAAAATCTTCTGAGAACCAACAAAGATCTTAAGAAGAGGAGAATTGCTGAGAATAATAAACCAATCCAAGAGCATGAGCCTTCTGGGTTGGATGCTCTTGCCAGTGCCGCGGTTTTAGGAGACAATCTTGTTGATCCTGTGGAGTCATCAGCTGGAGCCACCACCAGACACCCTAGACACCGTCCCGGCTGCTCCTGTATTGTGTGCATTCAACCACCAAGTGGAAAGGGGAGACACAAGCCAACATGTACTTGCAACGTGTGCATGACTGTGAAGCGCCGGTTCAAAACCCTGATGCTTAGAAAGAAGAAGCGCCAATCGGAGCGCGAAGCAGATGCTGCTCAAAAAGGTCATATTCCCCGAAAAGATGAGTCAGATACCAATGGAAGAGCTTCAAGAGATTATCCTAAACCGAGTCACTTGGACAAAGAGGGAGGACTAAACAAAGATCAACAACCAGCCCATGTGGGAGAGTCGAATGCCGGACAAATAGACCTGAACTCGCATCCGAATCGCGACGACATGGCAGCCGATACATCGGCGCCTTGCACCTCGAATCATCTTGAAACAACAAACCGAGAGGTAAGGAACTATATGAATCAAAATGGTGTTAGAAGCTACAATAATGGTGAAATGCAGGATAATCAGCATCCTTCTTTACTCAATCAATCTAATGGAGGGTGCTTTGGATCATCCATTGTGTGGAAAATGGAAAGAAAAGATGAGGTTTACAATCATGCCAATCAAAGTCAAAGCCATAGTCAAAACAACAATCTTTCTTGA 2649 0.4515 MGSDICVNGSCCVHEWKKGWPLRSGGFAQLCIKCGFMEEWKREIIDTLSANEYSLFCNNFHRRETGWKECNFCNKPIHCGCIASKSLFEYLDFGGVGCVSCVNASQLRLTRNTENGSVSTTKNNASDRHSAHIDNRQFVSSVDEGKLMEFCRIVEASESSRWNHAQRDNIISCNGQNGKEVTFREVESGFSNVIKPSVQSLTFSALENSRPTWEIKSRHEPMTQPSLNMCLGNPSGSNLVLPSATEIAEGRLESKASNFQQRSRPILPKPSKTGLTMNVETDKGSTSQARIARPPAEGRGKNQLLPRYWPRITDQELERLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPHISQSEGLPLRVQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTVTFSRIDPGGKLVMGFRRATNSSDTQDASTSAQSNGISTTGTISGGTENLLSGSNYADLLQSAKGNGEPNSSGHPEHPRSVSEKKRTRNIGPKSKRLLIDNEDSMELRLTWEEAQDLLRPPPSVKPSIVTIEDQIFEEYDEPPVFGKRTIFSACSSGGKEQWAQCDDCSKWRKLPVDALLPPKWNCSENVWDASRASCSAPEEMSSRELENLLRTNKDLKKRRIAENNKPIQEHEPSGLDALASAAVLGDNLVDPVESSAGATTRHPRHRPGCSCIVCIQPPSGKGRHKPTCTCNVCMTVKRRFKTLMLRKKKRQSEREADAAQKGHIPRKDESDTNGRASRDYPKPSHLDKEGGLNKDQQPAHVGESNAGQIDLNSHPNRDDMAADTSAPCTSNHLETTNREVRNYMNQNGVRSYNNGEMQDNQHPSLLNQSNGGCFGSSIVWKMERKDEVYNHANQSQSHSQNNNLS* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0517 882 MobiDBLite consensus disorder prediction 274 288 - -
Ahy1g0517 882 CDD B3_DNA 330 431 IPR003340 GO:0003677
Ahy1g0517 882 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 834 - -
Ahy1g0517 882 ProSiteProfiles Zinc finger CW-type profile. 569 619 IPR011124 GO:0008270
Ahy1g0517 882 Coils Coil 615 642 - -
Ahy1g0517 882 Gene3D - 310 437 IPR015300 -
Ahy1g0517 882 MobiDBLite consensus disorder prediction 490 509 - -
Ahy1g0517 882 MobiDBLite consensus disorder prediction 725 771 - -
Ahy1g0517 882 MobiDBLite consensus disorder prediction 260 302 - -
Ahy1g0517 882 Pfam B3 DNA binding domain 332 432 IPR003340 GO:0003677
Ahy1g0517 882 MobiDBLite consensus disorder prediction 433 461 - -
Ahy1g0517 882 ProSiteProfiles B3 DNA-binding domain profile. 332 433 IPR003340 GO:0003677
Ahy1g0517 882 MobiDBLite consensus disorder prediction 721 814 - -
Ahy1g0517 882 Pfam CW-type Zinc Finger 574 616 IPR011124 GO:0008270
Ahy1g0517 882 SUPERFAMILY DNA-binding pseudobarrel domain 330 432 IPR015300 -
Ahy1g0517 882 MobiDBLite consensus disorder prediction 800 814 - -
Ahy1g0517 882 MobiDBLite consensus disorder prediction 473 489 - -
Ahy1g0517 882 MobiDBLite consensus disorder prediction 473 509 - -
Ahy1g0517 882 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 3 834 - -
Ahy1g0517 882 MobiDBLite consensus disorder prediction 775 789 - -
Ahy1g0517 882 SMART B3_2 332 433 IPR003340 GO:0003677
Ahy1g0517 882 Gene3D - 572 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0517 Ahy-Chr1 8060188 8067327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0517 1 799 B3 DNA Binding Superfamily AT2G30470 50.858 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy1g0517 B3 1.40E-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0517 - - gmx:100789848 1310.82