Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0510 ATGGACCCTGACATTGCGCGGTGGGTTGCGGAATTCCACCTCCGGAGTTCCGCCCCCGATTCCCTCGTCTCCAAGATCCTTAGGGTCCTTAATCTCTCCGGCGCCGATCCCAAACTTAAGAAAACCCTACTCCTCCGCACCCTCCGATCCGAACTCTGCAATGCCTCAATCACCGAAACCGCTCTCGAGATACTGGAGCAAATCGAAGCGATTGACCGAAACGACGCCGTTCCGATCATCGATTCCATGCGCAGAGCCTACTGCGCCGTCGCCGTCGAGTGCACCGTCAAATTCCTCCCCGCCTCCTACGACGGGACCACCAGCGGTGAGTACTTATCCGCGGTGACGCGTATCTGGCGCGGCCGCGTGGAGGAGCTGGAGCAGCGCCAGAGCGAGCTGTTCTTCGACGAGATTGCGCGATGGAGGGACGACATTGAGGCCGCTCTTTTTGACACTAGGGTTTCTGATAGGTTGAAGGAGTTGAATACCCGAAACGACGCGTTTACTGAAGTTAGGTTTTATCTGCAGGAAGTGTGGGAAACAATGGGTCCTTCTTTTCTTGAATCGGTAGCAGAAATGACAAAGAACAAAGGAAAGACGAAAGGCAAGGGGAAAGAATTGCCGAATGTGATTTTGAATCCTGTGCCGGAGACTAGAGTGGTAGGGTGTACGACAGGTGTTTGCAGAAATGCCTCTGGTGCTGAACAGGCAAGGGATCATGGTGTTGATGACAATGGTGACGGAGGCAATGATGGTTCACGTTGCATGGACGGTGTGGAGGTGAAGAGAGCTGAAGGTTCTGTTGATGGAACCCAGGAGCATGCAAAGAAGAAGAAAGCAAGAGGCAATCCTCAACTTCAACGCAAGCCGCCTGCATTTCGTAGATGCAGTAGAGGAGTTAAAATGTCTAGTGCTGAGGAATTGGGGACAGAAAGATCATGGAGAAAAAATGATACTGTGCTAAGTGGAGAAGTTAAAACGGCCCGAGAATCTCTTAAATCAAGTTTTTCAGAGCTACGAGCATTGGTCAATGATCCTCTTCCTGAGGCATTAGATATATCTGATGCTGTTAGATCTAAACTTGCACGGAAAGGTACAAATCATGAACAGCCAATGGAAAACCATAGCAGAGATGTAGATGTACCAAACTCAAATACTTGCATGGCTATTATTCCTTATCAACCTAAAGATGCCGAGCACAAGAAGTTGCCTTCTGTTCATCATAGTAGAGTTAATGCTGAACGTCCGAATTCAATTGAGCCGAACAATACTGCTCATAAAAGACCCAGTTTGATGGAGCCGAATGGTACTTCTCAAACTTATGAGTGGAATGATTCAATAGAAAACATGCCCAATGGAATGCAGCTAAGAAGGAAGAAAAGAAAATGGTCTTCATTGGAAGAGGAGACACTAAGAACTGGCGTACAAATGTTTGGCACAGGAAATTGGAAAACAATTCAAAGTTTTTACAGTGATGTATTTGAACATAGACTAGCAGTTGATTTGAAGGACAAGTGGAGAAACATGATGCGGTATTGA 1539 0.4743 MDPDIARWVAEFHLRSSAPDSLVSKILRVLNLSGADPKLKKTLLLRTLRSELCNASITETALEILEQIEAIDRNDAVPIIDSMRRAYCAVAVECTVKFLPASYDGTTSGEYLSAVTRIWRGRVEELEQRQSELFFDEIARWRDDIEAALFDTRVSDRLKELNTRNDAFTEVRFYLQEVWETMGPSFLESVAEMTKNKGKTKGKGKELPNVILNPVPETRVVGCTTGVCRNASGAEQARDHGVDDNGDGGNDGSRCMDGVEVKRAEGSVDGTQEHAKKKKARGNPQLQRKPPAFRRCSRGVKMSSAEELGTERSWRKNDTVLSGEVKTARESLKSSFSELRALVNDPLPEALDISDAVRSKLARKGTNHEQPMENHSRDVDVPNSNTCMAIIPYQPKDAEHKKLPSVHHSRVNAERPNSIEPNNTAHKRPSLMEPNGTSQTYEWNDSIENMPNGMQLRRKKRKWSSLEEETLRTGVQMFGTGNWKTIQSFYSDVFEHRLAVDLKDKWRNMMRY* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0510 512 SMART sant 459 512 IPR001005 -
Ahy1g0510 512 MobiDBLite consensus disorder prediction 235 311 - -
Ahy1g0510 512 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 457 512 IPR017930 -
Ahy1g0510 512 PANTHER MYB TRANSCRIPTION FACTOR 1 512 - -
Ahy1g0510 512 Pfam Myb-like DNA-binding domain 460 509 IPR001005 -
Ahy1g0510 512 CDD SANT_TRF 461 511 - -
Ahy1g0510 512 Gene3D - 463 512 - -
Ahy1g0510 512 SUPERFAMILY Homeodomain-like 457 511 IPR009057 -
Ahy1g0510 512 MobiDBLite consensus disorder prediction 256 280 - -
Ahy1g0510 512 MobiDBLite consensus disorder prediction 361 383 - -
Ahy1g0510 512 ProSiteProfiles Myb-like domain profile. 455 510 IPR001005 -
Ahy1g0510 512 MobiDBLite consensus disorder prediction 361 376 - -
Ahy1g0510 512 MobiDBLite consensus disorder prediction 414 437 - -
Ahy1g0510 512 PANTHER MYB TRANSCRIPTION FACTOR 1 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0510 Ahy-Chr1 7834196 7837169 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0510 463 510 Single Myb Histone (SMH) Gene Family AT1G15720 50.000 1.01e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy1g0510 Myb_DNA-binding 5.20E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0510 - K11111 ahf:112794013 875.93