Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0509 ATGGACCCTGACATTGCGCGGTGGGTTGCGGAATTCCACCTCCGGAGTTCCGCCCCCGACTCCCTCGTCTCCAAGATCCTTAAGGTCCTTAATCTCTCTGCCGCCGATCCCAACCTTAAGAAAACCCTACTCCTCCGCACCCTCCGATCCCAACTCTGCAATGCCTCAATCACCGAAACCGCTCTCGAGATACTGGAGCAAATCGAAGCGATTGACCGAAACGACGCCGTTCCGATCATCGATTCCATGCGCAGGGCCTACTGCGCCGTCGCCGTCGAGTGCACCGTCAAGTACCTCGCCGCCTCCTACGACGGCACCACCAGCGGTAAGTACTTATCCGCGGTGACGCGTATCTGGCGCCGCCGCGTGGAGGAGTTGGAGCAGCGCCAGAGCGAGCTGTTCTTCGACGAGACTGCGCGATGGAGGGACGACATTGAGGCCGCACTTTTTGACACTAGGGTTTCTGATAGGTTGAAGGAGTTGAATACCCGAAACGACGCGTTTACTGAAGTTAGGTTTTATCTGCAGGAAGTGTGGGAAACAATGGGTCCTTCTTTTCTTGAATCAGTAGCAGAAATGACAAAGAACAAGGGAAAGACGAAGGGCAAGGGGAAAGGATTGCCGAATGTGATTTTGAATCCGGCACCGGTGACTATAGTGCCAGGGTATACGACAGGTGTTTGCAGAAATGCCTCTGGTGCTGAGCAGGCAAGGGATCATGGTGTTGATGACAATGGTGACGGAGGCAATGATGGTTCACGTTGCATGGACGGTGTGGAGGTGAAGAGAGCTGAAGGTTCTGTTGATGGAACCCAGGAGCATGCAAAGAAGAAGAAAGCAAGAGGCAATCCTCAACATAAACGCAAGCCATCTGCATTTCGTAGATGCAGTAGAGGAGTTAAAATGTCTAGTGCTGAGGAATTGGGGACAGAAAGGTCATGGAGAAAAAATGATACTGTGCTAAGTGGAGAAGTTAAAACGGCCCGAGAATCTCTTAAATCAAGTTCTTCGGAGCTACGGGCATTGGTCAATGATCCTCTTCTTGAGGCATTGGATATACCTGACGCTTTTAGATCTAAACTTGCACGGAAAGGTACAAATCATGAACAGCCAATGGAAAACCATAGTGGAGATGTAGATGTACGAAACTCAAATACTTGCAGTACTATTAGTCCTTATCAACCTAATGATGCCGAGCACAAGAAGTCGCCTTCTGTTGAGCCGAACAAAACTGCTCATAAAAGACCCAATTTGATGGAGCCGAGTGGTACTTCTCAAACTTATGAGTGGAATGATTCAATAGAAAACATGCCCAATGGAATGCAGCCAAGAAGGAAGAAAAGGAAGAATAGAAAATGGTCTTCATTAGAAGAGGAGACACTAAGGACTGGTGTACAAATGTTTGGTGCAGGAAATTGGAAAACAATTCAAAGTTTTTACAGTGATGTATTTGAACATAGACTATCAGTTGATTTGAAGGACAAGTGGAGAAACATGATGCGGTAG 1506 0.4814 MDPDIARWVAEFHLRSSAPDSLVSKILKVLNLSAADPNLKKTLLLRTLRSQLCNASITETALEILEQIEAIDRNDAVPIIDSMRRAYCAVAVECTVKYLAASYDGTTSGKYLSAVTRIWRRRVEELEQRQSELFFDETARWRDDIEAALFDTRVSDRLKELNTRNDAFTEVRFYLQEVWETMGPSFLESVAEMTKNKGKTKGKGKGLPNVILNPAPVTIVPGYTTGVCRNASGAEQARDHGVDDNGDGGNDGSRCMDGVEVKRAEGSVDGTQEHAKKKKARGNPQHKRKPSAFRRCSRGVKMSSAEELGTERSWRKNDTVLSGEVKTARESLKSSSSELRALVNDPLLEALDIPDAFRSKLARKGTNHEQPMENHSGDVDVRNSNTCSTISPYQPNDAEHKKSPSVEPNKTAHKRPNLMEPSGTSQTYEWNDSIENMPNGMQPRRKKRKNRKWSSLEEETLRTGVQMFGAGNWKTIQSFYSDVFEHRLSVDLKDKWRNMMR* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0509 501 SUPERFAMILY Homeodomain-like 448 500 IPR009057 -
Ahy1g0509 501 CDD SANT_TRF 453 501 - -
Ahy1g0509 501 MobiDBLite consensus disorder prediction 234 312 - -
Ahy1g0509 501 PANTHER MYB TRANSCRIPTION FACTOR 1 501 - -
Ahy1g0509 501 MobiDBLite consensus disorder prediction 377 398 - -
Ahy1g0509 501 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 445 501 IPR017930 -
Ahy1g0509 501 PANTHER MYB TRANSCRIPTION FACTOR 1 501 - -
Ahy1g0509 501 MobiDBLite consensus disorder prediction 256 278 - -
Ahy1g0509 501 Gene3D - 453 501 - -
Ahy1g0509 501 ProSiteProfiles Myb-like domain profile. 445 500 IPR001005 -
Ahy1g0509 501 MobiDBLite consensus disorder prediction 364 456 - -
Ahy1g0509 501 MobiDBLite consensus disorder prediction 279 295 - -
Ahy1g0509 501 SMART sant 449 501 IPR001005 -
Ahy1g0509 501 MobiDBLite consensus disorder prediction 418 438 - -
Ahy1g0509 501 Pfam Myb-like DNA-binding domain 452 499 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0509 Ahy-Chr1 7807081 7810816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0509 394 500 Single Myb Histone (SMH) Gene Family AT1G15720 34.188 6.02e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy1g0509 Myb_DNA-binding 1.40E-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0509 - K11111 ahf:112794013 959.903