LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy1g0503	ATGCCACAGCAAGAGTTTTCAATGGCTCTAATGATTCTTCTCATTGTTCTCTCTATTGATATGATTATCATGCAAGGTGCCACAGCTGACTATGGTGGTTGGGAGAGTGCTCATGCCACTTTCTATGGTGGTGGTGATGCCTCTGGCACAATGGGAGGTGCTTGTGGATATGGGAATTTGTATAGCCAAGGTTATGGAACGAACACAGCAGCATTAAGCACTGCTTTGTTCAACAATGGACTAAGCTGTGGATCATGCTATGAGATGAAGTGTAATGATGACCCAAGATGGTGCAAGCCGGGTTCGATCATTGTCACGGCCACCAACTTCTGCCCGCCGAACCCGGCTCTGCCCAACAACAATGGTGGTTGGTGCAACCCTCCTTTGCAGCACTTTGACATGGCTGAGCCAGCATTCTTGCAAATTGCTGAATATAGGGCTGGAATTGTGCCTGTTGCTTTTAGAAGAGTTCCTTGCATGAAGAAGGGAGGAATAAGATTCACCATCAATGGCCACTCTTACTTCAACCTAGTTTTGGTAACAAACGTTGGAGGTGCTGGTGATGTTCATTCAGTTTCCATCAAAGGATCAAGAACTGGGTGGCAATCAATGTCAAGAAACTGGGGGCAAAATTGGCAAAGCAACTCTTACCTCAATGGTCAAACCCTCTCATTCCAAGTCACCGCCAGTGACGGTAGAACTGTCACAAGCTTCAACGTGGCACCATCTAATTGGCAGTTTGGTCAAACCTTCCAAGGAAGCCAATTCTAG	771	0.4656	MPQQEFSMALMILLIVLSIDMIIMQGATADYGGWESAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCNDDPRWCKPGSIIVTATNFCPPNPALPNNNGGWCNPPLQHFDMAEPAFLQIAEYRAGIVPVAFRRVPCMKKGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSIKGSRTGWQSMSRNWGQNWQSNSYLNGQTLSFQVTASDGRTVTSFNVAPSNWQFGQTFQGSQF*	257

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy1g0503	256	Pfam	Expansin C-terminal domain	165	242	IPR007117	-
	Ahy1g0503	256	PRINTS	Expansin signature	210	231	IPR002963	GO:0009664
	Ahy1g0503	256	PRINTS	Expansin signature	64	78	IPR002963	GO:0009664
	Ahy1g0503	256	PRINTS	Expansin signature	175	196	IPR002963	GO:0009664
	Ahy1g0503	256	PRINTS	Expansin signature	91	102	IPR002963	GO:0009664
	Ahy1g0503	256	PRINTS	Expansin signature	163	175	IPR002963	GO:0009664
	Ahy1g0503	256	PRINTS	Expansin signature	239	255	IPR002963	GO:0009664
	Ahy1g0503	256	PRINTS	Expansin signature	103	113	IPR002963	GO:0009664
	Ahy1g0503	256	PRINTS	Expansin signature	139	152	IPR002963	GO:0009664
	Ahy1g0503	256	PRINTS	Expansin signature	122	139	IPR002963	GO:0009664

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy1g0503	Ahy-Chr1	7713365	7716929	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy1g0503	6	256	Expansin Gene Family	AT2G40610	77.778	7.65e-151	419

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy1g0503	-		-	gmx:100499976	465.307

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