Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0495 ATGGAGATATCATTGTTAAAGATGCTTGTTAATGGCATATCCTCGTTTCTGAATTTATCGTTTTCTGGAAACATCAACTCGGAACCCATCTCAAAGTATTACCAAAAGGCAGAGGAGATACTTAGGCTGTTGAAGCCAATTATTGATGCAATTGCTCATTCTGAGTTAGCTTCTGATGAAGTGCTTAGTAAGATATTTGAAGAACTTGGTCATGCAATTGATGAATTAAGGGAGCATATTGAGAACTGGCACCTGTTGTCCAGCAAAGTTTACTTTGCTATGCAAGTTGAACCCTTGATATCTAGGATAAGGACTTTGGGGCTCAATATTTTCCAGCAGCTGAAGGTTTCTCAGCAATGTCTCCCTGATGAATTGAGTTCTGATCATCTGGAGCATTGTGTTCAGAAACTTAAGCATTTGGGACATGAAGAAGTATCAGCAGTCATTAAGGAAGCTATTACTGAACAACGGGAAGGTTTAGGACCCAGTTCAGAGGTCCTGGCAAAAATTGCTGATAGCCTAGGTCTAAAGTCTAATCAGGAGGTTCTGATTGAGGCTGTGGCCCTTGAAAAATTGAAGGAGAATGCTGAGCAAACTGAAAAGACTGCAGAAGCTGAATATATTGATCAAATGATTGCTGTTGTAACACGTATGCATGAGCGGCTTAGTATGCTTAAGCAAGCTGAGAGTAGCAGCCCAGTTCCAGTACCTGCTGATTTTTGTTGTCCTCTCTCTTTGGAGTTGATGACTGATCCAGTGATTGTGGCATCAGGACAAACCTATGAGCGGGCTTTCATTAGGAACTGGATTGATCTTGGACTTACTGTTTGTCCGAAGACTCGGCAGGCACTAGCTCATACCAACCTAATACCTAACTACACTGTAAAAGCACTAATTGCAACTTGGTGTGAGTCAAACAATGTGAAACTGGTTGAGCCCTCGAAGTCCACTAGTTTAAATCAAGCATCTGTCATTCAGGGGTATATGGAGTCTGGTACAACCAGGGACTCACCTGTCTTTTCTCATTCCAGGGGCAACCAGCCATCCTCACCTGAGTCGGTGCGTTCTCATTCTTTTAGTTCACCAGGTTTAGATGACAGGTCTGCTAGCTCAGATGAAAGCAGTGTGGATTCAGTTGGCCAACCCTCAATGTCGCCATCTAAAAGGGAATCGTCTGATGCCTTTATCCCTGACCAAGCCCAAGCCCATGTTAGAACTATTTCTTACTCCAGTGCACTTTCTAGTGGAAATTTCCCCCAAGAAACACCAGGTGATGATAATAGTTCTCCTCAGTTGTCAAGCAGTCCAGCATACAGTAGAGATGTTTCCGGTGAATTAAATCCCGGCCCAGATTCTGCTAGTGCTGCTACCGTTCCATCTTCACATAGAGAACCAGAGTTCCCACCTCGATCGGAGACAAGGTCCCGAACATCTTTGTGGCAACGACCATCCCAGAGGCTTGTTCCTAGGATGGCATCCTCTCCTGCTGCTGAAACTAGAGCTGATCTTTCTGCTATTGAATCCCAGGTTCGGAAGTTGGTTGAGGGCTTGAAGAGCACCAATATTGATACTCGGAGAGAGGCAACAGTAGAAATTCGGCTTCTTGCCAAGCATAATATGGATAATCGAATTGCAATTGCAAACTGTGGAGCCATTACCATATTAGTTGAGTTACTCAGATCACCAGATACAAGGATCCAGGAAAATGCTGTTACTGCACTTCTGAACTTATCAATCAATGACAATAACAAAAGTGCAATAGCAAATGCTGGTGCAATTGAACCTCTGATTCATGTGCTGAAGACAGGGAGCCCAGAAGCCAAGGAGAATTCTGCTGCCACTCTATTCAGCTTATCAGTGATTGAGGAAAACAAAATTAGCATTGGTAGGTCGGGGGCTATTGGACCGTTGGTTGATCTATTAGGGAATGGAACCCCTAGGGGTAAGAAAGACGCAGCCACTGCTTTGTTTAATTTGTCAATATTTCATGAAAACAAGAATCGAATTGTGCAAGCTGGTGCCGTGAAGCACCTTGTGGAGTTAATGGACCCTGCTGCCGGAATGGTTGATAAGGCAGTGGCAGTCTTAGCAAATCTGGCCACAATTCAAGAAGGAAGAGTTGCTATTGGTCAGGAAGGTGGGATTCCTGTTTTGGTCGAGGTTGTCGAGTTGGGCTCTGCAAGAGGAAAAGAGAATGCAGCAGCAGCTCTTCTGCATCTATGCTTACATAGCAACAGATTCTTAAGCATGGTGCTTCAGGAAGGAGCTGTCCCACCATTAGTCGCGTTATCACAGTCAGGTACCCCGAGGGCCAAAGAAAAGGCCCAGGCTCTCCTCAATCAATTTAGAAGTCAGAGACATAATGCGGGGAGGGGCTGA 2379 0.446 MEISLLKMLVNGISSFLNLSFSGNINSEPISKYYQKAEEILRLLKPIIDAIAHSELASDEVLSKIFEELGHAIDELREHIENWHLLSSKVYFAMQVEPLISRIRTLGLNIFQQLKVSQQCLPDELSSDHLEHCVQKLKHLGHEEVSAVIKEAITEQREGLGPSSEVLAKIADSLGLKSNQEVLIEAVALEKLKENAEQTEKTAEAEYIDQMIAVVTRMHERLSMLKQAESSSPVPVPADFCCPLSLELMTDPVIVASGQTYERAFIRNWIDLGLTVCPKTRQALAHTNLIPNYTVKALIATWCESNNVKLVEPSKSTSLNQASVIQGYMESGTTRDSPVFSHSRGNQPSSPESVRSHSFSSPGLDDRSASSDESSVDSVGQPSMSPSKRESSDAFIPDQAQAHVRTISYSSALSSGNFPQETPGDDNSSPQLSSSPAYSRDVSGELNPGPDSASAATVPSSHREPEFPPRSETRSRTSLWQRPSQRLVPRMASSPAAETRADLSAIESQVRKLVEGLKSTNIDTRREATVEIRLLAKHNMDNRIAIANCGAITILVELLRSPDTRIQENAVTALLNLSINDNNKSAIANAGAIEPLIHVLKTGSPEAKENSAATLFSLSVIEENKISIGRSGAIGPLVDLLGNGTPRGKKDAATALFNLSIFHENKNRIVQAGAVKHLVELMDPAAGMVDKAVAVLANLATIQEGRVAIGQEGGIPVLVEVVELGSARGKENAAAALLHLCLHSNRFLSMVLQEGAVPPLVALSQSGTPRAKEKAQALLNQFRSQRHNAGRG* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0495 792 MobiDBLite consensus disorder prediction 413 500 - -
Ahy1g0495 792 MobiDBLite consensus disorder prediction 332 394 - -
Ahy1g0495 792 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 632 674 IPR000225 GO:0005515
Ahy1g0495 792 ProSiteProfiles U-box domain profile. 235 309 IPR003613 GO:0004842|GO:0016567
Ahy1g0495 792 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 472 788 - -
Ahy1g0495 792 Pfam U-box domain 236 306 IPR003613 GO:0004842|GO:0016567
Ahy1g0495 792 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 591 633 IPR000225 GO:0005515
Ahy1g0495 792 Pfam Armadillo/beta-catenin-like repeat 541 578 IPR000225 GO:0005515
Ahy1g0495 792 Pfam Armadillo/beta-catenin-like repeat 580 619 IPR000225 GO:0005515
Ahy1g0495 792 Pfam Armadillo/beta-catenin-like repeat 623 660 IPR000225 GO:0005515
Ahy1g0495 792 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 7 368 - -
Ahy1g0495 792 MobiDBLite consensus disorder prediction 413 441 - -
Ahy1g0495 792 SMART Ubox_2 239 302 IPR003613 GO:0004842|GO:0016567
Ahy1g0495 792 Coils Coil 179 209 - -
Ahy1g0495 792 SUPERFAMILY ARM repeat 509 782 IPR016024 -
Ahy1g0495 792 PANTHER U BOX DOMAIN-CONTAINING 7 368 - -
Ahy1g0495 792 MobiDBLite consensus disorder prediction 472 488 - -
Ahy1g0495 792 CDD RING-Ubox_PUB 240 282 IPR045210 -
Ahy1g0495 792 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 550 592 IPR000225 GO:0005515
Ahy1g0495 792 SUPERFAMILY RING/U-box 223 312 - -
Ahy1g0495 792 SMART arm_5 580 620 IPR000225 GO:0005515
Ahy1g0495 792 SMART arm_5 621 661 IPR000225 GO:0005515
Ahy1g0495 792 SMART arm_5 662 701 IPR000225 GO:0005515
Ahy1g0495 792 SMART arm_5 702 742 IPR000225 GO:0005515
Ahy1g0495 792 SMART arm_5 539 579 IPR000225 GO:0005515
Ahy1g0495 792 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 216 317 IPR013083 -
Ahy1g0495 792 Gene3D - 486 789 IPR011989 -
Ahy1g0495 792 PANTHER U BOX DOMAIN-CONTAINING 472 788 - -
Ahy1g0495 792 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 673 714 IPR000225 GO:0005515
Ahy1g0495 792 MobiDBLite consensus disorder prediction 332 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0495 Ahy-Chr1 7614191 7622066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0495 196 792 U-box Gene Family AT2G23140 60.559 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0495 - - gmx:100811250 1231.85