Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0475 ATGGCATACAAAAAACCATTCCTTGACCTTAAGCTTACCACGGAAGATGTTATCTTAGTAAAGCCATCAAAACCAACTCCTTCATCTGTAATCTCTCTATCCACAATTGATAATAGACCAGAACTTAATAGTCTATGTCAAACCATTCACATATTTAAACCACCAAATAACACTATTCTTATTGATGATCCTCAAAATGCCCAAAATGACCCTGCACTTGTGATCAAAGAAGCACTCTCCAAGGCTTTGTTCTATTACTACCCTCTTGCTGGAAGGCTTGTAAAACATGCTGATGGGAAACTTAGAATCCATTGCAATGCATATGGAGTTCCATTTCTGGAGGCCATTGCGAACTGCAAGCTTTCTTGCCTTCACTACCTTGATGGCAGTGACACTGAAAATGCAAAACACTTGGCTTTTGATAATCCTTTTCATGAAGATGATGATGATGAAAATGGTTACCAATATCCCTTGGGAATAAAGGTGACCAAGTTTCTCTGTGGCGGGTTCACAGTTGGAATAGGCGCATCACATGCTGTTTTTGATGGAATTGGAGGATCTCAATTCTTTCAAGCCATGGCTGAACTTGCGAGCGGAAAAAGCGAGCCATCTGTGAAACCTGTGTGGGAGAGGGAAAGGCTAAATGGGTCAGTTACTGAACATCCATTGCTAAGTCCCATGGATGAGGCCTCGGCCGCAGTTTCACCTTACTTGACCACCAAAACTCTCGTGCATGAATGTTTTAAGGTGGATAGTGAGAGCATAAAAAGACTCAAAAAGAGTTTAATGAAGGAAATAAGTTATAGCAATAATATTAATTACTCTTTGGAGGGTGAAAGCTTTACAAGTTTTGAAGCCCTTGGTGCTTATGTTTGGAGGTCAAGAACTAGAGCTTTGAAACTCAACTATGATGGAAAAACTTCATTGGCTATTGTTGTAGGGTTAAGAAGGAATTACTCCTTGATTCCTCCTTTGCCTGAAGGGTACTATGGGAATGCTTTTGTGGACCCAAAAGTTGTGCTAACAGTAAAGGAACTCAATGAAAAGCCACTCTCACATGTGGTGAAGATGATCAAAGAGACTAAGAAGCTTGGTTTCTCAAAGGAGTATATTAGGAATGCTATTGACACAAAAGAAACAAAAATAGAGCACTTTGATTATCAAGGTATCGGTGCATCTATGGTTTTGTCTAGTTGGATGCACTTGGGTATGTTGGAAAACATGAACAAAGGGTGGGCTAAGCCAGTGAACATGGTACCGGCACCATGCAACATGTTTGGGACAGTTGGAGTGTGCATTTTTTCACCTCCTAGTGACTTGGATCCTTCAATGAATGGAGGTGTTAGAATCTTTGTTTCTCTACCTAATGATGCTATGCCCATGTTCAAGGAGGAGATGGAAGCTCTCATGCTTGTTAAACCATAG 1425 0.4063 MAYKKPFLDLKLTTEDVILVKPSKPTPSSVISLSTIDNRPELNSLCQTIHIFKPPNNTILIDDPQNAQNDPALVIKEALSKALFYYYPLAGRLVKHADGKLRIHCNAYGVPFLEAIANCKLSCLHYLDGSDTENAKHLAFDNPFHEDDDDENGYQYPLGIKVTKFLCGGFTVGIGASHAVFDGIGGSQFFQAMAELASGKSEPSVKPVWERERLNGSVTEHPLLSPMDEASAAVSPYLTTKTLVHECFKVDSESIKRLKKSLMKEISYSNNINYSLEGESFTSFEALGAYVWRSRTRALKLNYDGKTSLAIVVGLRRNYSLIPPLPEGYYGNAFVDPKVVLTVKELNEKPLSHVVKMIKETKKLGFSKEYIRNAIDTKETKIEHFDYQGIGASMVLSSWMHLGMLENMNKGWAKPVNMVPAPCNMFGTVGVCIFSPPSDLDPSMNGGVRIFVSLPNDAMPMFKEEMEALMLVKP* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0475 474 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 470 - -
Ahy1g0475 474 Pfam Transferase family 11 468 - -
Ahy1g0475 474 Gene3D - 229 466 IPR023213 -
Ahy1g0475 474 Gene3D - 8 226 IPR023213 -
Ahy1g0475 474 PANTHER ACYL TRANSFERASE 4 6 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0475 Ahy-Chr1 7236901 7238777 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0475 10 464 Monolignol Biosynthesis Gene Families AT5G48930 26.737 5.48e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0475 K20240 - gmx:100801843 519.62