Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0452 ATGAATAACAATAATAAAATTGAAGAAGTTGTGTTAGTTGTGGATGATTTGAGATCAATATGTATGAATTATCGGTGTAGAATATGCCATGAAGAAGAATTCGAGAGCTCCAAAAGCTTGGAAGCTCCTTGTGCTTGTTCTGGAACCGTTAAGTTTGCTCATAGAGATTGCATTCAGAAATGGTGCAATGAAAAAGGCAATACAACTTGTGAGATTTGTCTCCAGCAATATGAACCTGGATATACAGCACCTCCAAAGAAATCTCAGATAGCTGATGCAGCAATGACCATTAGGGATAGCCTGCAAATAACAAGAAGGGAGGTAGAACCCTTAATAAACGCAACAACAATTGAAAGCGATTACTCTGAATGCACTTCTGCTGCAGATAGAAGCGCTTCGTGCTTTCGATCACTTGCTTTCTCTTTTACACTCATCTTGCTTGTAAGACATCTTTTTGCATTGCTTACAAGTGGCATGGAAGATTATCCATTTACAATTCTTACTGTGTTTATATTAAGGGCAAGTGGAATTATTGTGCCCATGTACATAATAATTAGGACAATTGGAGGCTTACATAGTAGTATTCACCGCCACTATCATCAGGATTCTGATGATGATGACACATCGACAATATCTGATGGAGATGATGAAGAAAACGAGACAAGCCAGGATGAAGATTTAGGATATTCATAG 693 0.3795 MNNNNKIEEVVLVVDDLRSICMNYRCRICHEEEFESSKSLEAPCACSGTVKFAHRDCIQKWCNEKGNTTCEICLQQYEPGYTAPPKKSQIADAAMTIRDSLQITRREVEPLINATTIESDYSECTSAADRSASCFRSLAFSFTLILLVRHLFALLTSGMEDYPFTILTVFILRASGIIVPMYIIIRTIGGLHSSIHRHYHQDSDDDDTSTISDGDDEENETSQDEDLGYS* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0452 230 MobiDBLite consensus disorder prediction 199 230 - -
Ahy1g0452 230 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 5 216 - -
Ahy1g0452 230 ProSiteProfiles Zinc finger RING-CH-type profile. 18 80 IPR011016 GO:0008270
Ahy1g0452 230 ProSiteProfiles Zinc finger RING-type profile. 26 73 IPR001841 -
Ahy1g0452 230 SUPERFAMILY RING/U-box 23 78 - -
Ahy1g0452 230 SMART ringv_2 25 74 IPR011016 GO:0008270
Ahy1g0452 230 CDD RING_CH-C4HC3_MARCH 26 73 - -
Ahy1g0452 230 Pfam RING-variant domain 26 73 IPR011016 GO:0008270
Ahy1g0452 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 83 IPR013083 -
Ahy1g0452 230 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 5 216 IPR033275 -
Ahy1g0452 230 MobiDBLite consensus disorder prediction 208 230 - -
Ahy1g0452 230 Pfam Protein of unknown function (DUF3675) 79 188 IPR022143 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0452 Ahy-Chr1 6976533 6981458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0452 26 73 C3H Transcription Factor Family AT2G37950 42.857 6.72e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0452 - - gmx:100797029 337.421