Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0446 ATGGCAGCAACAAGAAGCATTGGCAATGCTATCCTCCGAAACCACTCCCTCTGTTTCTCCACTGCTTCTTGTTACCGGAAACAGATTTCCCTCGCCAGTCTCTTCCAGAGGTACGGTTTCCCCCCTTCCCAAATTCCCCACATCATCTCCAACAACTCCTTTCTCTTAGATTCCAACATACCTGAACTTGAGAAATCACTCGCCACTCTCTTCTCCTTCCGAATTCCCCAAAATGCCGTTGTCTCCCTCATTCGCAACTGCCCTGCCGTGTTGGAACCCAAGTTCCTCCAAAACTGGGAGCAGGGATTGTCGAAGCTCAAGGCCATGAACCCTTCCTCATCCATGATTGTGAACTTCTTGGAGTGTTCTAGAAGATTCCAACTGGACCCGGTTGAGGCTTCCAAGAAAGTCGAGGCATTGAAGAGCTTGGGATTTTCTGATGACGTTGTGTCGAAGATTTTGGAGGGTTTCCCGAGCGTGATTGCAGTGAGCAGGAGGCAACTTGCTTCTGTGATTGAGTTTCTGGTGGAATTTGGGATTCCGAGGGATGAGGTGGTTGATCGAGTTGTGCGGTTGAACCCAAGGGTTTTGGGAATTGGGGTTGAGCAGAGGTTGAAGCCCCTGATTCGTGAATTGGAGGAGTTAAGATTTCCTAGGCACGAAATTAGGACCGAGGTAGTTAGGGTGCCAAGGATTTTGGGAATGGAGATTGGGGAATTTTCACGGTGTTTGCGGTTGCTAGAGGGTTTGAAGTGTAGGGAAGCCATCAAAGAGAGGATTTTTCAGGATGGTTTGCTGAGGGCTTGTTTTGAAGTGAAGTTAAAAGTGGATTGCTTGTGCCATCACGGATTGATTCGAAGCGATGCTTTGAAGTTGTTATGGAAAGAGCCAAGGTTGATAACCTATGATGTAGAGTCCATTGAGAAAAAGATTGGGTTCTTGGTGCAGAGGATGAATTATAGTGTTGATTGTTTGCTTCATGTTCCTGAGTACTTGGGTGTGAACTTTGAGAAGCAGATTGTTCCTAGGTACAATGTAATGGAGTACTTGAAAGCGAAAGGCACGCTTGGTTTCGAGTTTGGACTAAAGGACATGGTAAAGCCAACCAGGCTTAGATTTTACAATCTTTATGTCAAGCCCTATCCAGAGTGTGAAAAGATTTATGGGCGGTTTTCTGGAATTACCAAAGTTAAAAGTAAGCATCCACCTGGTCTATGGAAACTCTTTAAACCTCCCAAGTTCCTGACAACCGATGAAGATGCGAAGAATTTGAAGTCATTCATGGACACACTGGTATAG 1299 0.458 MAATRSIGNAILRNHSLCFSTASCYRKQISLASLFQRYGFPPSQIPHIISNNSFLLDSNIPELEKSLATLFSFRIPQNAVVSLIRNCPAVLEPKFLQNWEQGLSKLKAMNPSSSMIVNFLECSRRFQLDPVEASKKVEALKSLGFSDDVVSKILEGFPSVIAVSRRQLASVIEFLVEFGIPRDEVVDRVVRLNPRVLGIGVEQRLKPLIRELEELRFPRHEIRTEVVRVPRILGMEIGEFSRCLRLLEGLKCREAIKERIFQDGLLRACFEVKLKVDCLCHHGLIRSDALKLLWKEPRLITYDVESIEKKIGFLVQRMNYSVDCLLHVPEYLGVNFEKQIVPRYNVMEYLKAKGTLGFEFGLKDMVKPTRLRFYNLYVKPYPECEKIYGRFSGITKVKSKHPPGLWKLFKPPKFLTTDEDAKNLKSFMDTLV* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0446 432 PANTHER CGI-12 PROTEIN-RELATED 43 429 IPR003690 GO:0003690|GO:0006355
Ahy1g0446 432 Gene3D Transcription termination factor 3, mitochondrial 164 391 IPR038538 -
Ahy1g0446 432 SMART mt_12 187 218 IPR003690 GO:0003690|GO:0006355
Ahy1g0446 432 SMART mt_12 322 353 IPR003690 GO:0003690|GO:0006355
Ahy1g0446 432 SMART mt_12 223 253 IPR003690 GO:0003690|GO:0006355
Ahy1g0446 432 SMART mt_12 151 181 IPR003690 GO:0003690|GO:0006355
Ahy1g0446 432 SMART mt_12 290 321 IPR003690 GO:0003690|GO:0006355
Ahy1g0446 432 SMART mt_12 113 146 IPR003690 GO:0003690|GO:0006355
Ahy1g0446 432 Pfam mTERF 275 373 IPR003690 GO:0003690|GO:0006355
Ahy1g0446 432 Pfam mTERF 35 240 IPR003690 GO:0003690|GO:0006355
Ahy1g0446 432 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Ahy1g0446 432 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 43 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0446 Ahy-Chr1 6928833 6933487 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy1g0446 mTERF 5.70E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0446 - - aip:107646489 771.155