Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0444 ATGGGGGGTTCCTCACCTTGTGCTTCTTGCAAATTGTTGAGGCGGCGTTGCACCAAAGAATGCATCTTTGCTCCTTATTTTCCTTCTGATGATCCTCGCAAGTTTGCCATTGTGCACAAAGTCTTTGGCGCTAGCAATGTCAGCAAAATGCTTCAGGAACTTCCAATTGATCAAAGAGGAGATGCTGTAAGCAGTTTAGTTTATGAGGCAACTGCAAGAGTGAGAGACCCTGTGTATGGTTGTGTTGGAGCAATATCATACCTTCAAAATCAAGTTACACAATTACAAATGCAACTTGCAGTGGCTCAGGCAGAGATTCTAAGCATCCATCAGATGCAACAAGACCCTTCTAATAACAATACTACCTTATTACCAAGTCAATTATTAGATCAAGATTATAGTGAAAAGTTTCTGCTCCTATCATCAGCTGAAAACAATAACAACTATGACTTTCTTCCCCAATATCTTAGCTTTGCTTCTTCTTCTTCTTCTTCTTCAAATGTATTCCAAGACTCTGAGCCTCTTAAGAGAGAGTCTTTTTGTTAA 546 0.3974 MGGSSPCASCKLLRRRCTKECIFAPYFPSDDPRKFAIVHKVFGASNVSKMLQELPIDQRGDAVSSLVYEATARVRDPVYGCVGAISYLQNQVTQLQMQLAVAQAEILSIHQMQQDPSNNNTTLLPSQLLDQDYSEKFLLLSSAENNNNYDFLPQYLSFASSSSSSSNVFQDSEPLKRESFC* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0444 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 179 - -
Ahy1g0444 181 Coils Coil 85 105 - -
Ahy1g0444 181 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Ahy1g0444 181 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Ahy1g0444 181 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 2 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0444 Ahy-Chr1 6919526 6920661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0444 3 140 AS2 family AT2G30130 76.812 5.52e-71 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy1g0444 LOB 8.30E-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0444 - - aip:107644491 344.354