Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0413 ATGAACACTTTGAGTCAAATATTCCAAAACATGTTCTCAGACAACAGCAACATAATGCTTGCAGCCATAATATCTTTGCTCCTTGTAATCCTCTTTGTCCTTCTCCTCCATCTCTATGCTAAATGGTTCCTAGCTCAGGCTCAGGCTCAGGCAAATGCTCGCCGCCGTCGTCGTCGCCGCCGCAGAGCAGCCACAGTAACCGTTTCTGATGTTCTTGGCCCTGCAAGGTTCCACCACTTCCACAGCTTCAACATAGAAGATTCACCAATATTCCCATCATCATCAAGTTCTCATCACAATACATCAAAAGGGTTAGATTCTTCTGTCATTGCAAGAATTCCTCTTTTCATTTATACTACTACTAATTCAGAAGCATTGAAAGGTAGTGAAGAAGTTGAGAATAGTGATGAGCTTGAGTGTGTGATTTGTTTGAGTTCTTTTGAAGATGGAGAGATGGGAAGGTGTTTACCAAAATGTGGACATGGTTTTCATGTTGATTGCATTGATATGTGGCTGAATTCTCATTCAAATTGTCCAATTTGCAGGGCTCCAATAATTCTTAGTAGTGGGATTGTTGTTGAGAATGATAATTCCCAATTAGGTTCTGTTATTGATGATGGGGGTGATCATAATGATCATGATCATGATCATGTTCATGTTCATAATGTTGATGATGGTAGTGGTGCCTCTGCTTTAGTTGAGATTGTGGTTGATGATTTTGGTCAAAGTTCTGAGATTAGAGAGAATAATGAAAATGGAGAAAGAGTGAGTAGTAGCAGTGATTCTTCTGTCTCAGAAACAGAAACCTCAACATCTTTGGTAATTGTTGGTTGTTCTTTGAAGAGAATGTTGAGCAAAGTTTTTCCATCTAACAATGCAAATGTAAATGAATTACAAACTTAG 903 0.3898 MNTLSQIFQNMFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAQAQANARRRRRRRRRAATVTVSDVLGPARFHHFHSFNIEDSPIFPSSSSSHHNTSKGLDSSVIARIPLFIYTTTNSEALKGSEEVENSDELECVICLSSFEDGEMGRCLPKCGHGFHVDCIDMWLNSHSNCPICRAPIILSSGIVVENDNSQLGSVIDDGGDHNDHDHDHVHVHNVDDGSGASALVEIVVDDFGQSSEIRENNENGERVSSSSDSSVSETETSTSLVIVGCSLKRMLSKVFPSNNANVNELQT* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0413 300 CDD RING-H2_EL5_like 139 182 - -
Ahy1g0413 300 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Ahy1g0413 300 SUPERFAMILY RING/U-box 130 188 - -
Ahy1g0413 300 SMART ring_2 140 181 IPR001841 -
Ahy1g0413 300 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 186 IPR013083 -
Ahy1g0413 300 MobiDBLite consensus disorder prediction 243 266 - -
Ahy1g0413 300 Pfam Ring finger domain 139 182 IPR001841 -
Ahy1g0413 300 PANTHER - 2 294 - -
Ahy1g0413 300 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 294 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0413 Ahy-Chr1 6327857 6329811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0413 12 191 Rapid Response to Elicitors AT3G16720 37.778 4.30e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0413 - - adu:107473099 472.626