Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy1g0335 | ATGCAGTCCAAGTCTGAAACTGCAAATCGACTGAGGTCGGATCCACATTCCTTTCAACCTAGTGGTGTTTGTTCTGAGCCTTGGTGGCATGGTGGTGGCTACAGTGCTATCCCTCAAGCAATGCCTGGTGCAAATGCATCCAATTCCTCCTCTCTTGAATGCCCTAATGGTGAATCAGAATCCAATGAGGAAGGTCAGTCCTTATCCAATAGTGGGATGAATGAGGAAGATGATGATGCTGCCAAGGATTCACAACCTGCCGATCCTAATCAATCAGGAAATTATGGACAAGAAAACCAAGGGATGCAGCATTCTGCACCTTCAATGCGCGAAGAAGGCCTCGCTCAGGCTCCACAGCTGGAACTCGTTGGTCATTCAATTGCATGTGCTACAAATCCTTATCAAGATCCGTACTATGGGGGCATGATGGCAGCTTATGGACCCCAGCAATTGGGATTCGCTCCTTTTATAGGAATGCCCCATGCCAGAATGCCATTGCCTCTTGAGATGGCACAAGAGCCTGTTTATGTGAATGCTAAGCAATACCAAGGAATTCTGAGGCGAAGACAGGCTCGAGCAAAAGCAGAACTTGAAAAGAAGCTAATAAAATCCAGAAAGCCATATCTTCATGAATCTCGGCATCAGCATGCTATGAGAAGGGCAAGGGGTACCGGAGGGCGTTTTGCAAAGAAATCTGAAGTTGAGGGCTCAAACAAGGGCAAGGAAAAGGATGGTTCAGGTCCAGTCCTGTCATCACAGTCAATCAGTTCATCTGGTTCTGAACCTTTGCCTTGCGATTCCAATCAAACATGGAACTCTCCCAATGTGCAACTAAATGCAAGGGGATCGAAAGTGCACGACAAATACGAAAATGGCAGTGGCTCCTACCACAGTCATAATGGTTTGCAATCTTATCATTTGCATTCTGGTGACAGAGTGGACGAAGGGGACTGTTCGGGTCAGCAACGGGGAAGCATCACCAACGAGCACGCATCGGCGAGGCGCCTTGCTATTCAGTAG | 1020 | 0.4775 | MQSKSETANRLRSDPHSFQPSGVCSEPWWHGGGYSAIPQAMPGANASNSSSLECPNGESESNEEGQSLSNSGMNEEDDDAAKDSQPADPNQSGNYGQENQGMQHSAPSMREEGLAQAPQLELVGHSIACATNPYQDPYYGGMMAAYGPQQLGFAPFIGMPHARMPLPLEMAQEPVYVNAKQYQGILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRARGTGGRFAKKSEVEGSNKGKEKDGSGPVLSSQSISSSGSEPLPCDSNQTWNSPNVQLNARGSKVHDKYENGSGSYHSHNGLQSYHLHSGDRVDEGDCSGQQRGSITNEHASARRLAIQ* | 340 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy1g0335 | 339 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Ahy1g0335 | 339 | MobiDBLite | consensus disorder prediction | 206 | 225 | - | - | |
Ahy1g0335 | 339 | PRINTS | CCAAT-binding transcription factor subunit B signature | 174 | 196 | IPR001289 | GO:0003700|GO:0006355 | |
Ahy1g0335 | 339 | PRINTS | CCAAT-binding transcription factor subunit B signature | 205 | 228 | IPR001289 | GO:0003700|GO:0006355 | |
Ahy1g0335 | 339 | MobiDBLite | consensus disorder prediction | 226 | 242 | - | - | |
Ahy1g0335 | 339 | Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B | 173 | 228 | IPR001289 | GO:0003700|GO:0006355 | |
Ahy1g0335 | 339 | MobiDBLite | consensus disorder prediction | 1 | 114 | - | - | |
Ahy1g0335 | 339 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9 | 31 | 330 | - | - | |
Ahy1g0335 | 339 | MobiDBLite | consensus disorder prediction | 204 | 339 | - | - | |
Ahy1g0335 | 339 | MobiDBLite | consensus disorder prediction | 247 | 280 | - | - | |
Ahy1g0335 | 339 | ProSiteProfiles | NF-YA/HAP2 family profile. | 171 | 231 | IPR001289 | GO:0003700|GO:0006355 | |
Ahy1g0335 | 339 | PANTHER | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED | 31 | 330 | IPR001289 | GO:0003700|GO:0006355 | |
Ahy1g0335 | 339 | Gene3D | - | 171 | 233 | - | - | |
Ahy1g0335 | 339 | MobiDBLite | consensus disorder prediction | 85 | 106 | - | - | |
Ahy1g0335 | 339 | SMART | cbf3 | 170 | 231 | IPR001289 | GO:0003700|GO:0006355 | |
Ahy1g0335 | 339 | ProSitePatterns | NF-YA/HAP2 subunit signature. | 176 | 196 | IPR018362 | GO:0003677|GO:0016602 | |
Ahy1g0335 | 339 | MobiDBLite | consensus disorder prediction | 41 | 74 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy1g0335 | Ahy-Chr1 | 4956118 | 4960064 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy1g0335 | 16 | 273 | CCAAT-HAP2 Transcription Factor Family | AT5G12840 | 55.985 | 7.11e-92 | 273 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YA | Ahy1g0335 | CBFB_NFYA | 6.30E-27 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy1g0335 | K08064 | - | gmx:100808378 | 524.242 |