Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0310 ATGAGCGATTCTGCTTACAAGGTCGACACCACCTCCCGCCTTGCTCAATGGCGAATCGACAACTTGGCCTCTTGCACTTACCGCAAATCCGATCCTTTCAAGATCGGAAAATGGAACTGGCATTTGTCTGTGGAGAAGAACAGGGTTTTGTTTGTTAAATTGTATCCAGAAATTTCGAATCTAACACGAGATAACCCCCCGATTGCGTCCTTCATCATTAGGGTGGTTAGTTCTGTTGGAGATCGCAAGTCCCTCACTCATCCAGAGATAAGAGATAAGCTGATAAAGAGCAACGAGGACTTTGTTTGGGCAATTGAGGTTCCACTAACTGGGAAATTCATTATCGACGTTGAGTTCCTTGATTTGAAGACTGCATCCCCAAACGGTGAGGAACCTTGTTCTATTTGGGCTGCCGGTTTTACTCAGCAAAGATCAAATGCGACGGCGCTTGAGACTCTGGGTAAAATGCTAACAGAAGGGATTCACACAGACATAACCATCAATGCTTCGGACGGAAGCATAGGAGCTCACAGGGCAGTTCTGGCTGCCCGGTCGCCTGTGTTTCGCAGCATGTTTTCGCACGATCTCAAGGAGAAAGAGCTGTCAACTGTCAACATCCAAGACATGTCGATTGAAGCTTGCCAGGCACTTCTAAATTATCTCTATGGGATCATTAAGAACGACGAGTTTTTGATGCATAGATTAGCCCTTCTACATGCTGCTGATAAATATGACATATCTGACTTGAGAGAGGCATGTCATGAGAGTCTTCTAGAAGACATTGACACGAAAAATGTCCTCGAGAGGCTCCAGAATGCGTCGCTGTATCGGCTGATGAAACTGAAGATGAGCTGTATTAGATATCTTGTGAAATTTGGTAAGGTATTCGAAATTCGCGATGATTTCAATTGCTTCATGCAAAATGCAGATAGGGATTTGATTGCTGAAGTCTTCCATGAAGTTCTTGATGCATGGAAAGGATTCTGA 987 0.4448 MSDSAYKVDTTSRLAQWRIDNLASCTYRKSDPFKIGKWNWHLSVEKNRVLFVKLYPEISNLTRDNPPIASFIIRVVSSVGDRKSLTHPEIRDKLIKSNEDFVWAIEVPLTGKFIIDVEFLDLKTASPNGEEPCSIWAAGFTQQRSNATALETLGKMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHDLKEKELSTVNIQDMSIEACQALLNYLYGIIKNDEFLMHRLALLHAADKYDISDLREACHESLLEDIDTKNVLERLQNASLYRLMKLKMSCIRYLVKFGKVFEIRDDFNCFMQNADRDLIAEVFHEVLDAWKGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0310 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Ahy1g0310 328 SUPERFAMILY POZ domain 147 259 IPR011333 -
Ahy1g0310 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Ahy1g0310 328 Pfam BTB/POZ domain 155 259 IPR000210 GO:0005515
Ahy1g0310 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Ahy1g0310 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 328 IPR044714 -
Ahy1g0310 328 PANTHER OS08G0495500 PROTEIN 1 328 - -
Ahy1g0310 328 Gene3D Potassium Channel Kv1.1; Chain A 140 291 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0310 Ahy-Chr1 4534621 4537675 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Ahy1g0310 BTB 1.20E-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0310 K10523 - gmx:100790186 605.134