Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0276 ATGGGAACCTGCATGGAGAATTTTAATGAGGAGGAACACATTTTTCGCAGTAAATTCAAGCCGGTCCAAGTTCCGGACGACGTGACGCTGCCGGAATTCGTGCTCGAAAACGCCGAATTATACGCCAACAAGGTTGCATTTGTGGATGGTGTGAGTGAGAAAGCTATGACTTATAGTGAGGTGGTGAGAGACACAAAGAGATTGTCAAAGGCATTAAGGTCTCTTGGTTTGAGGAAGGGGAATGTGGTGATTGTGGTGCTTCCAAATGTGGTAGAATATGGAGTCATTGCTTTGGGAATAATGGCTGCTGGTGGTGTGTTCTCAGGAGCAAATCCAGCATCACATGTTTCAGAGATTAAGAAGCAAGTAGATTCTGCTGATGCCAAATTAATTGTCACAGATTCTACAATATATGATAAGGTGAAAGCTCTAGAGTTGCCTGTAATTGTGCTAGCTGATGAGCCAATTGAGGAAGCTATGAACTACAAAAAACTACTTGAAGCGGCGGACCGCGCCGGCGACGATTCGGCTAAAGAACCAATTCATCAGAATGATCTATGCGCCATGCCATTTTCATCAGGCACCACAGGGCTCTCAAAGGGTGTGATGCTTACACACAGAAACTTAGTAGCAAATCTTTGCTCAACACTCTTCGGTGTGGGACAAGAAATGATTGGCAATGTGACAACACTAGGACTAATCCCATTCTTTCACATCTATGGCATAACTGGAATATGTTGTGCCACTCTTAGGAACAAAGGCAAAGTTGTGGTTATGGGAAGGTATGATTTGAAGACATTTATTACTGCATTGATCAAACATGAGGTCAATTTTGCACCAATTGTGCCCCCAATTATTCTTGGATTGGTGAAGAATCCAATAGTGGATGAATTTGATCTTAGCAAGCTTAAACTCCAGGCTATTATGACTGCAGCTGCTCCACTTGCACCAGAAGTCCTTAATGCATTTAAACAAAAGTTTCCTGGTGTTGTTGTCCAAGAGGCATATGGACTAACTGAGCATAGCTGCATCACACTTACCCATGCAATAAAAGACGCTGGGGTTCTACACAAAAATTCAGTGGGGTTCATCCTCCCAAATTTGGAAGTTAAATTTATTGATCCTGATACTGGTCGATCCCTCCCAAGGAACACACCTGGGGAAATTTGTGTCAGAAGCCAATGTGTAATGCAAGGTTACTATAAACAGGTTGATGAAACTGCTCATACAATTGACAAGGATGGATGGCTTCACACTGGGGATGTAGGATACATAGATGATGAAGAGAATATATTTATCGTTGATCGCATCAAGGAGTTAATTAAATACAAAGGATTCCAAGTAGCTCCTGCTGAGTTAGAGGCCATTTTGTTATCTCATCCGTCGGTAGAAGATGCTGCAGTTGTGCCGTTGCCAGATGAAGAAGCAGGGGAAATCCCAGCTGCGAGTGTTGTCGTGAGCCGCGGCGCAAGAGTGACCGAAAAGGAAATCATGGACTATGTTGCTTCAAATGCTGCTCACTACAAGAAAGTGAGGGTGGTGCACTTTGTAGAAACCATACCAAAATCACCTTCTGGCAAGATAATGAGAAGGCTTATCAAAGAGAGGATGGTGAAAAAAATGAAGACAAACTCCACACCAAAATCCAACATTTCTTAA 1659 0.4292 MGTCMENFNEEEHIFRSKFKPVQVPDDVTLPEFVLENAELYANKVAFVDGVSEKAMTYSEVVRDTKRLSKALRSLGLRKGNVVIVVLPNVVEYGVIALGIMAAGGVFSGANPASHVSEIKKQVDSADAKLIVTDSTIYDKVKALELPVIVLADEPIEEAMNYKKLLEAADRAGDDSAKEPIHQNDLCAMPFSSGTTGLSKGVMLTHRNLVANLCSTLFGVGQEMIGNVTTLGLIPFFHIYGITGICCATLRNKGKVVVMGRYDLKTFITALIKHEVNFAPIVPPIILGLVKNPIVDEFDLSKLKLQAIMTAAAPLAPEVLNAFKQKFPGVVVQEAYGLTEHSCITLTHAIKDAGVLHKNSVGFILPNLEVKFIDPDTGRSLPRNTPGEICVRSQCVMQGYYKQVDETAHTIDKDGWLHTGDVGYIDDEENIFIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAVVPLPDEEAGEIPAASVVVSRGARVTEKEIMDYVASNAAHYKKVRVVHFVETIPKSPSGKIMRRLIKERMVKKMKTNSTPKSNIS* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0276 552 Gene3D - 439 543 IPR045851 -
Ahy1g0276 552 Gene3D - 12 438 IPR042099 -
Ahy1g0276 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 540 - -
Ahy1g0276 552 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 7 540 - -
Ahy1g0276 552 CDD 4CL 24 531 - -
Ahy1g0276 552 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Ahy1g0276 552 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
Ahy1g0276 552 SUPERFAMILY Acetyl-CoA synthetase-like 13 539 - -
Ahy1g0276 552 Pfam AMP-binding enzyme 36 443 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0276 Ahy-Chr1 3905427 3909686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0276 5 538 Monolignol Biosynthesis Gene Families AT1G62940 72.119 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0276 K01904 - gmx:100811418 893.649