Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0235 ATGATGCCTGGCGTTAAAGTTCATCCATCGTACGCAGAGTCAGAGACATTCATCGAGGTGGATCCGTCGGGAAGATACGTGAGGTACCCGGAGCTTCTAGGATCAGGTTCAGTGAAGAGAGTGTACAGAGCATTTGACAAAGAAGAGGGAATAGAAGTGGCCTGGAACCAAGTGAGGCTCAAGAACTTCAAGGATGACCCTGTCATGGTCGATAGGCTTCACTCCGAAATCATGTTGCTAAGAGGCTTCTCGAACGACCACATCATTTCGCTATTCGCATCCTGGAAGGATGACGTCAGCGACACTTTGAATTTCATCACGGAAGTGTGCAGCAGCGGCAGTCTGAGGGAGTACAGGAAGAGGCACAAGAATGTCTCTATGAAGGCTGTGAAGAAATGGTCAAAGCAGATTCTAGAAGGTTTGAATTATTTGCACACACACGATCCCTGCATCATCCACAGAGACCTCAACTGCAGTAATGTGTTTGTCAATGGAAATACGGGCCAGGTTAAGATCGGTGACTTGGGCTTGGCGGCGGTTGTGGGGAGGAGTCACTCGGCGCATTCGGTTCTGGGGACGCCGGAGTTCATGGCGCCGGAGTTGTACTCGGAGAAGTACACGGAGAAGGTGGACATATACTCGTTTGGGATGTGTGTGTTGGAGATGGTGACGAGAGAGATTCCGTACAGCGAGTGTGAGAGTGTTGTGAAGATATACAAGAAGGTGACGTCAGGCGTGAGGCCGCAGTCGCTGAATAAGATTAACAATTCCGACCTCAAGTCCTTCATTCACAAGTGCATCGCTTACCAGCCCTCTGCTAGACCTTCTGCTGCCCAGCTTCTTCACGACCCTTTCTTTCATGACCTTCATGAGTCATGA 879 0.4994 MMPGVKVHPSYAESETFIEVDPSGRYVRYPELLGSGSVKRVYRAFDKEEGIEVAWNQVRLKNFKDDPVMVDRLHSEIMLLRGFSNDHIISLFASWKDDVSDTLNFITEVCSSGSLREYRKRHKNVSMKAVKKWSKQILEGLNYLHTHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAVVGRSHSAHSVLGTPEFMAPELYSEKYTEKVDIYSFGMCVLEMVTREIPYSECESVVKIYKKVTSGVRPQSLNKINNSDLKSFIHKCIAYQPSARPSAAQLLHDPFFHDLHES* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0235 292 SUPERFAMILY Protein kinase-like (PK-like) 23 286 IPR011009 -
Ahy1g0235 292 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Ahy1g0235 292 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Ahy1g0235 292 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 2 290 - -
Ahy1g0235 292 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 290 - -
Ahy1g0235 292 Pfam Protein kinase domain 31 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g0235 292 ProSiteProfiles Protein kinase domain profile. 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0235 Ahy-Chr1 3410571 3412222 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0235 13 286 MAP Kinase Kinase Kinase AT5G55560 71.533 8.64e-158 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Ahy1g0235 Pkinase 2.40E-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0235 K08867 - gmx:100782039 455.677