Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy1g0223 | ATGGGTATCTCTCGTGATTCTATGCACAAGAGGCGCGCCACTGGTGGCAAGAAGAAGGTTTGGAGGAAGAAGAGAAAGTATGAGCTTGGAAGGCAACCAGCAAACACAAAGCTCTCCAGCAACAAAACTGTTAGGAGGATCAGGGTTCGAGGTGGGAATGTAAAATGGCGTGCTTTGAGGCTTGACACTGGGAACTACTCTTGGGGTAGTGAAGCTGTGACTCGCAAAACGAGGATTCTCGATGTGGTGTATAATGCCTCCAACAATGAACTTGTTCGAACTCAGACTTTGGTCAAGAGTGCCATCGTTCAGGTTGATGCTGCACCTTTCAAACAGTGGTATCTCCAGCATTATGGTGTCGACATTGGTCGCAAGAAGAAGGGTGCAACTTCTGGCAAGAAAGAAGGGGAGGATGCTGAAACTGCAACCGAAGAAGTGAAGAAGAGTAACCATGTCTTGAGAAAGTTGGAGAAGCGTAAACAAACCCGGGTGCTTGATTCCCACATTGAAGAACAATTTGGAAGTGGTCGCCTCTTGGCTAGTATCTCATCCCGCCCCGGTCAATGTGGTCGTGCTGATGGATATATATTGGAGGGCAAAGAGCTTGAGTTCTACATGAAGAAGCTTCAGAAAAAGAAGGGCAAGGGTGCTGCTTAA | 657 | 0.4749 | MGISRDSMHKRRATGGKKKVWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKGATSGKKEGEDAETATEEVKKSNHVLRKLEKRKQTRVLDSHIEEQFGSGRLLASISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA* | 219 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy1g0223 | 218 | MobiDBLite | consensus disorder prediction | 125 | 145 | - | - | |
Ahy1g0223 | 218 | ProSitePatterns | Ribosomal protein S8e signature. | 11 | 30 | IPR018283 | GO:0003735|GO:0005840|GO:0006412 | |
Ahy1g0223 | 218 | TIGRFAM | eS8: ribosomal protein eS8 | 1 | 199 | IPR001047 | GO:0003735|GO:0005840|GO:0006412 | |
Ahy1g0223 | 218 | Gene3D | - | 162 | 215 | - | - | |
Ahy1g0223 | 218 | Gene3D | - | 32 | 161 | - | - | |
Ahy1g0223 | 218 | PANTHER | 40S RIBOSOMAL PROTEIN S8 | 1 | 218 | - | - | |
Ahy1g0223 | 218 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Ahy1g0223 | 218 | CDD | Ribosomal_S8e_like | 5 | 197 | - | - | |
Ahy1g0223 | 218 | Coils | Coil | 139 | 159 | - | - | |
Ahy1g0223 | 218 | Pfam | Ribosomal protein S8e | 5 | 197 | IPR022309 | - | |
Ahy1g0223 | 218 | PANTHER | 40S RIBOSOMAL PROTEIN S8 | 1 | 218 | IPR001047 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy1g0223 | Ahy-Chr1 | 3304035 | 3306371 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy1g0223 | 1 | 206 | Cytoplasmic Ribosomal Protein Gene Family | AT5G59240 | 85.437 | 6.22e-128 | 358 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy1g0223 | K02995 | - | gmx:100527325 | 376.711 |