Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0201 ATGGCATCGTCATCAGACTCATGGATGAAGGAATATAATGAAGCAGTGAAACTCGCCGATGATATCAATGGCATGATTTCTGAGCGGAGTTCATTATCCACATCTGGACCAGAAGCTCAGCGTCATGCATCTGCTATAAGAAGGAAGATTACTATCTTAGGGATCAGACTTGATAGCTTGCAATCCCTTTTATCTAAAGTCCCTGGAAAATCTGAGAAGGAGATGAATCGCCGCAGGGAAACACTTACAACTTTGAGGTCAAAAGTTAACCAAATGGCTTCAACACTGAACATGTCAAACTTTGCAAATAGGGATAGTTTATTTGGTCCTGAAATAAAACCAGATGCAATGAGCAGAACTGTTGGCCTGGATAACAGTGGACTCGTTGGACTTCAAAGGCAAATTATGAAAGAGCAAGATGAAGGCCTTGAAAAATTGGAGGAGACTGTTGTAAGTACAAAGCACATTGCATTAGCAGTGAATGAAGAGCTGAGTCTACACACTAGACTAATTGATGACTTGGACGAACATGTAGATGTTACAGATTCTCGTCTAAGGCGTGTCCAGAAGAACTTGGCAGTTTTAAACAAACGTACCAAGGGTGGTTGCTCCTGCTTGTGCATGCTTTTAGCAGTGGTTGGGATAGTGGTTTTGGTGGTTGTGATATGGTTGTTGGTCAAATATTTGTAG 690 0.4159 MASSSDSWMKEYNEAVKLADDINGMISERSSLSTSGPEAQRHASAIRRKITILGIRLDSLQSLLSKVPGKSEKEMNRRRETLTTLRSKVNQMASTLNMSNFANRDSLFGPEIKPDAMSRTVGLDNSGLVGLQRQIMKEQDEGLEKLEETVVSTKHIALAVNEELSLHTRLIDDLDEHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLAVVGIVVLVVVIWLLVKYL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0201 229 Pfam SNARE domain 170 221 IPR000727 -
Ahy1g0201 229 Gene3D - 135 197 - -
Ahy1g0201 229 SUPERFAMILY SNARE fusion complex 124 194 - -
Ahy1g0201 229 CDD SNARE_Qc 136 193 - -
Ahy1g0201 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 133 195 IPR000727 -
Ahy1g0201 229 PANTHER SYNTAXIN 1 223 IPR045242 -
Ahy1g0201 229 SMART tSNARE_6 128 195 IPR000727 -
Ahy1g0201 229 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0201 Ahy-Chr1 3000125 3004013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0201 1 229 SNARE and Associated Proteins AT1G16240 72.845 8.85e-124 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0201 K08503 - gmx:100794038 372.089