Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0169 ATGACAAATTTGCCCCCGTCATTATCAATGAACGCAGCCTTTGGCGGCAGCGGTGCTGCTCCTCCGCCTTCTCCCGGTGGCTCCTCCCAGAGCTCCCCCGGAGGCAACAAGGATCGCAAGATGGCCTCCGCCGAGCAGCTCGTCCTCGAGCTCAGCAACCCCGACCTCCGTGAAAACGCTCTACTCGAACTCTCCAAGGAAATAGTTTCAATATACCCTGTTCTTTCTCCACCAAATCTTACTCCAGCACAATCTAATCGTGTGTGCAATGCACTTGCTCTTCTTCAGTGCGTAGCCTCACACCCTGATACAAGGATGTTGTTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGCAAATCAAGACCATTTGAGTACTTGAGACTCACCAGTCTTGGCGTCATTGGTGCTTTGGTGAAGGTTGATGATACGGAAGTCATAAGTTTCCTTCTTTCAACTGAGATAATTCCATTGTGCCTGCGCACCATGGAAATGGGCAGTGAACTATCAAAAACAGTTGCAACTTTCATTGTTCAGAAAATCCTATTGGACGACGTGGGCTTGGATTATATTTGCACTACAGCAGAGCGTTTTTTTGCAGTAGGTCGAGTTTTGGGAAACATGGTGGCAGCTCTTGCTGAGCAGCCCTCATCTCGTTTGTTGAAGCATATCATCCGATGCTATCTTCGCCTATCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGTTGTCTTCCAGACATGTTAAGAGATGCTACTTTCAGCAACTGCCTTCGTGAGGACCTTACAACCAGGAGGTGGCTGCAACAATTGCTTCAGAATGTTGGTGTGAGTCGGGTGCCCACTCTGCAAGCCGGAGGCGGCTTCGACCATATGATGGTGACATGA 906 0.4823 MTNLPPSLSMNAAFGGSGAAPPPSPGGSSQSSPGGNKDRKMASAEQLVLELSNPDLRENALLELSKEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSNCLREDLTTRRWLQQLLQNVGVSRVPTLQAGGGFDHMMVT* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0169 301 Pfam Cell differentiation family, Rcd1-like 66 281 - -
Ahy1g0169 301 MobiDBLite consensus disorder prediction 23 37 - -
Ahy1g0169 301 SUPERFAMILY ARM repeat 53 254 IPR016024 -
Ahy1g0169 301 MobiDBLite consensus disorder prediction 1 42 - -
Ahy1g0169 301 PANTHER BNAA05G20110D PROTEIN 66 299 - -
Ahy1g0169 301 PANTHER UNCHARACTERIZED 66 299 - -
Ahy1g0169 301 PANTHER UNCHARACTERIZED 1 67 - -
Ahy1g0169 301 Gene3D - 35 282 IPR011989 -
Ahy1g0169 301 PANTHER BNAA05G20110D PROTEIN 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0169 Ahy-Chr1 2429795 2436977 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Ahy1g0169 Rcd1 4.80E-110 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0169 K12606 - gmx:100784529 507.294