Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0152 ATGAATAAGGATGCAGAGAATGATGCAAACAGTTTCACTGCAATGGGGAAATGCGTGGGAGATGGTGGCAATAATAGTGGTGGCGAAGACGGTGGTGGGGCGACAGCGACAGGCGAGGTGGCTTTGAAAAAGGGTCCTTGGACGACAATAGAAGATGCAATTCTAGTTGATTACGTGACAAAGCACGGTGAAGGAAATTGGAATGCAGTGCAAAGGAACACAGGGTTGGCTCGATGTGGAAAAAGTTGCAGGCTGAGATGGACAAACCATTTGAGACCAAATCTGAAGAAAGGTGCTTTCTCACCTGAAGAAGAAAAGCTCATCATTGAATTCCATTCTCAGTTTGGCAACAAATGGGCTCGAATGGCTGCTTTGTTGCTGGTACAGTTGCCTGGAAGAACTGACAACGAAATAAAAAATTATTGGAACACAAGGGTGAAGAGAAGGCAAAGGCAAGGTCTTCCTCTATACTCAGATGACCCTAATCGTTCCATTACTACAAGTACACCCACCACCAATGTAACCTATGTCGGTGAAAACTTCACCAACAACGCTCCCATAACCATGTTCGAGTTTATCAAACAGAGTTATCCTCATTCTCCATCTCCACGACATCATTCTCCTTTAACTTCTCCGCTACAACACAGGGCATCATCCTATTCTCATATGCTTTCCCCTCTATCCTCTCCAGCTCACTCCCCATTGTCCTCACCTGCAACTTCTTTGCCTCTCTCCTTCACCTTCCAGAGACCTGCACCATTGTTGTACAACCCTCTTAGCTTCAAGCGTTACCGCTCAACCCCAAGTTGTAACCCTAATACCTCCCCTATGATGAATAATCCAACCCACTTATCTGACATTGATAATGGGTTCCAATTCCCAATGCAGCTCAATTCGTCTTCTTTCTCCCACTTCTTTCAAAATCCGACGTTGTTGGATCTTGAAAGAAGTGGGTCCTCGTTGACGTCTTCTCCATCTAATGCTCAAAGCAAGATGCAACTTCTTTCGAATCAAATTCCGTTGTCGTTGCAAACGCAACAAATGGAGCCATTGGAAGTTAATTACGATATTGAGTACAATAATGACCCTAATTCTTTGAGTGCAAGTAATAGGTTGTTTGGGGATTTTCTATCAGAAACTCAACCCTCGACTTCTGGCCATCAGATTTTAAAGAAACGAAATTATCTGGGCTTAGATGAACGAGACAATAATGTGTTTGATTGCTGCCAAAGCTTTGATGACTCTCCTCTTAGCTCCCTTTATGGCTCTTCTAATCCAGTACTAAAACAGAAGGAAGAAGCAACTAACCTAAACCAATCCATGAATGAGGATTTATCAACATTTCTCACTGTAGTGCCTTCAATCATGCAAGACCAGCAAAATTGGCAATATAATTATTCAACAGAAGTTTCCGATAATGTCCAATCTTCTCATGTCATCATAGATGACAATTTTGGATTTGATATCAAGCCCAAACCTTCATTGTTTCCTCTTAGTATTGCTACAAACCATAATGATAATAGAGGATGTTACACATGGGATAATTTATCTAGCCAATGTTAA 1563 0.4203 MNKDAENDANSFTAMGKCVGDGGNNSGGEDGGGATATGEVALKKGPWTTIEDAILVDYVTKHGEGNWNAVQRNTGLARCGKSCRLRWTNHLRPNLKKGAFSPEEEKLIIEFHSQFGNKWARMAALLLVQLPGRTDNEIKNYWNTRVKRRQRQGLPLYSDDPNRSITTSTPTTNVTYVGENFTNNAPITMFEFIKQSYPHSPSPRHHSPLTSPLQHRASSYSHMLSPLSSPAHSPLSSPATSLPLSFTFQRPAPLLYNPLSFKRYRSTPSCNPNTSPMMNNPTHLSDIDNGFQFPMQLNSSSFSHFFQNPTLLDLERSGSSLTSSPSNAQSKMQLLSNQIPLSLQTQQMEPLEVNYDIEYNNDPNSLSASNRLFGDFLSETQPSTSGHQILKKRNYLGLDERDNNVFDCCQSFDDSPLSSLYGSSNPVLKQKEEATNLNQSMNEDLSTFLTVVPSIMQDQQNWQYNYSTEVSDNVQSSHVIIDDNFGFDIKPKPSLFPLSIATNHNDNRGCYTWDNLSSQC* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0152 520 Pfam Myb-like DNA-binding domain 44 91 IPR001005 -
Ahy1g0152 520 Pfam Myb-like DNA-binding domain 97 144 IPR001005 -
Ahy1g0152 520 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 24 515 - -
Ahy1g0152 520 CDD SANT 99 144 IPR001005 -
Ahy1g0152 520 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 24 515 - -
Ahy1g0152 520 MobiDBLite consensus disorder prediction 198 236 - -
Ahy1g0152 520 ProSiteProfiles Myb-like domain profile. 39 91 IPR001005 -
Ahy1g0152 520 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 95 IPR017930 -
Ahy1g0152 520 CDD SANT 46 91 IPR001005 -
Ahy1g0152 520 SMART sant 43 93 IPR001005 -
Ahy1g0152 520 SMART sant 96 148 IPR001005 -
Ahy1g0152 520 ProSiteProfiles Myb-like domain profile. 92 146 IPR001005 -
Ahy1g0152 520 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 150 IPR017930 -
Ahy1g0152 520 MobiDBLite consensus disorder prediction 200 236 - -
Ahy1g0152 520 Gene3D - 43 96 - -
Ahy1g0152 520 SUPERFAMILY Homeodomain-like 42 142 IPR009057 -
Ahy1g0152 520 Gene3D - 99 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0152 Ahy-Chr1 2239014 2241053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0152 31 503 MYB Transcription Factor Family AT4G26930 37.292 1.38e-65 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy1g0152 Myb_DNA-binding 1.60E-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0152 - K09422 ahf:112723793 927.161