Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0148 ATGTTTTCCTCATCACTCTCAACTTCCCTTCCTCCAAAACCTTACCTCTCTCACCCACTCTCCCCCTCACTCCACCAACCACCGTTCCCTCACTCTCGCCCTCCGTTTCCTCCTTCCATTCGCTGCGGCATTAGGGAACTCCGAGAAAGAATCGACATCGTTAAGAACACTCACAAGATCACTGAAGCAATGAAGCTCGTCGCGGCTGCCAGGGTCCGACGGGCCCAAGAAGCCGTCCTAAACGGCAGACCCTTCGCCGAAACGCTCGTTGAAGTCTTGCACGACATCAACTGCCGTCTCCGAGACGACGACGTCATCGTCCCCCTAACGGACGTCAGGCCCGTCAACTCCGTCGCCCTCGTTGTCGTCACCGGAGACCGCGGCCTCTGTGGCGGTTTCAATAACGCCGTCTTGAAGAAAGCCGAAGCTCGGATCCAACAGCTACACAAGCTTGGCTTGAATTGCGTTGTGATTAGCGTTGGGAAGAAGGGGAACGCGTTTTTCAGCCGCAAGGGAAGTGTTAGGGTTGATAGGTTCGTTGAATGTGGGAGCTTCCCCACTGTGAAAGAAGCTCAAATCATTGCTGATGATGTGTATTCACTGTTTGTTACAGAGGAGGTTGACAAGGTTGAGATTGTTTACACCAAGTTTGTGTCATTGGTGAAGTTTGATCCTGTGATTCAAACTCTGTTGCCGTTAACGGCTAAAGGCGAGGTTCGCGATGTGAATGGGAACTGCATTGATGCCATTGATGACGAATACTTTAGGTTGACTACAAAGGAAGGGAAGTTGGCAGTGGAGAGGGATGTTGCTGTCAGGGAATTTGCTACGCCGCCGATTATGGAGTTCGAGCAAGATCCGGTTCAGATTCTTGATGCTATGTTGCCTCTGTATTTGAACAGCCAGATCTTGAGGGGTTTGCAGGAATCACTAGCGAGTGAGCTTGCTGCTAGGATGGCTGCAATGTCTAATGCAACCGATAATGCTGTTGAATTGAAGAAGAATCTGTCGGTTGCTTATAATCGTGAACGGCAGGCAAAGATCACAGGGGAGATATTGGAGATTGTGGCCGGAGCTGAGGCACTAATACCAGTTGATTGA 1101 0.5059 MFSSSLSTSLPPKPYLSHPLSPSLHQPPFPHSRPPFPPSIRCGIRELRERIDIVKNTHKITEAMKLVAAARVRRAQEAVLNGRPFAETLVEVLHDINCRLRDDDVIVPLTDVRPVNSVALVVVTGDRGLCGGFNNAVLKKAEARIQQLHKLGLNCVVISVGKKGNAFFSRKGSVRVDRFVECGSFPTVKEAQIIADDVYSLFVTEEVDKVEIVYTKFVSLVKFDPVIQTLLPLTAKGEVRDVNGNCIDAIDDEYFRLTTKEGKLAVERDVAVREFATPPIMEFEQDPVQILDAMLPLYLNSQILRGLQESLASELAARMAAMSNATDNAVELKKNLSVAYNRERQAKITGEILEIVAGAEALIPVD* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0148 366 Hamap ATP synthase gamma chain [atpG]. 41 362 IPR000131 GO:0015986|GO:0045261|GO:0046933
Ahy1g0148 366 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 43 362 IPR035968 GO:0015986|GO:0045261|GO:0046933
Ahy1g0148 366 PANTHER ATP SYNTHASE GAMMA CHAIN 38 362 IPR000131 GO:0015986|GO:0045261|GO:0046933
Ahy1g0148 366 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 38 362 - -
Ahy1g0148 366 ProSitePatterns ATP synthase gamma subunit signature. 348 361 IPR023632 -
Ahy1g0148 366 MobiDBLite consensus disorder prediction 15 36 - -
Ahy1g0148 366 CDD F1-ATPase_gamma 44 359 IPR000131 GO:0015986|GO:0045261|GO:0046933
Ahy1g0148 366 Pfam ATP synthase 44 362 IPR000131 GO:0015986|GO:0045261|GO:0046933
Ahy1g0148 366 MobiDBLite consensus disorder prediction 1 36 - -
Ahy1g0148 366 Gene3D ATP synthase, gamma subunit, helix hairpin domain 42 104 - -
Ahy1g0148 366 Gene3D ATP synthase, gamma subunit, helix hairpin domain 264 362 - -
Ahy1g0148 366 Gene3D - 107 235 - -
Ahy1g0148 366 PRINTS ATP synthase gamma subunit signature 115 134 IPR000131 GO:0015986|GO:0045261|GO:0046933
Ahy1g0148 366 PRINTS ATP synthase gamma subunit signature 340 361 IPR000131 GO:0015986|GO:0045261|GO:0046933
Ahy1g0148 366 PRINTS ATP synthase gamma subunit signature 208 225 IPR000131 GO:0015986|GO:0045261|GO:0046933
Ahy1g0148 366 PRINTS ATP synthase gamma subunit signature 309 328 IPR000131 GO:0015986|GO:0045261|GO:0046933
Ahy1g0148 366 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 44 362 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0148 Ahy-Chr1 2184289 2185673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0148 13 362 Primary Pumps ATPases AT1G15700 70.822 4.22e-172 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0148 K02115 - qsu:112000322 483.796