Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy1g0146 | ATGCCTGAAATGCAGATGGATGAACCCATGGAAAGTGGTGAGAGGCCAGTCTTCAAAGATATTAGACGCTACTTCTGTGAATACTGTGGCATTTGCAGGTCTAAAAAGATCTTAATTACCTCCCACATCAATTCACAACACAAGGACGAGTTGGAAAAAGCTAGAGCTGAAGGAAATAATGAAGCACATTGCGAAAAGCCCAACAACACTTGCCAACAATGTGGTGCTAGCTTCAAAAAACCTGCCTACTTGTTGCAGCACATGCAAAGCCATTCACTTGAGAGGCCGTATGTGTGTATGGTTGATGATTGTCAGGCAAGTTACAGAAGAAAGGATCATTTGAATCGTCACCTTCTACAGCATGAAGGGAAAACTTTTAAATGTCCAATGGAGAATTGCAACCTAATCTTCTCAATAAAAGGTAATATGGCAAGACATGTTAAAGAGATTCATGATGAAGGATCTACATCCACAAATGTAGAAAGTAAGCAGTTTGTGTGCCCAGAAACTGGCTGTGGAAAGGTTTTCAAGTTTGCATCAAAGCTTCGTAAACATGCAGATTCTCATGTTAAGCTGCAGTCGGTAGATGTAGTGTGCTTGGAGCCTGGTTGCATGAAACATTTCACTAATAACCAGTGCCTTAAAGAACATATTGAATCCTGTCATCAATATGTAACCTGCGACACTTGTGGAAGTAGACAACTGAAAAAGAATATTAAAAGGCACCTTCGCACACATGAAGCTGACAAATCATTGGCAGAGTTTAAATGTGAATTTAAGGGCTGTAGCTGCAAATTCTCAAGTAAATCTAATCTCGTTACACATAAGAAGGCCGTGCACTTTAAAGAAAAGCCCTTTGTGTGTGGTTTTCCTGATTGTGGCCTGAGATTTGCTTACAAACATGTCAGAGATAAACACGAAAAAACTGGGAAACATGTTTTTACCCATGGGGATTTTGAAGAAGCTGATGAACAATTCAGGTCAAGGCCAAGGGGTGGGAGGAAGAGAGTGTGTCCTACTGTAGAAATGTTGGTCAGGAAAAGGGTTACACCACCTAGTCAATTGGAGAATTTGTTATTTATGCAGGAGTGA | 1092 | 0.4057 | MPEMQMDEPMESGERPVFKDIRRYFCEYCGICRSKKILITSHINSQHKDELEKARAEGNNEAHCEKPNNTCQQCGASFKKPAYLLQHMQSHSLERPYVCMVDDCQASYRRKDHLNRHLLQHEGKTFKCPMENCNLIFSIKGNMARHVKEIHDEGSTSTNVESKQFVCPETGCGKVFKFASKLRKHADSHVKLQSVDVVCLEPGCMKHFTNNQCLKEHIESCHQYVTCDTCGSRQLKKNIKRHLRTHEADKSLAEFKCEFKGCSCKFSSKSNLVTHKKAVHFKEKPFVCGFPDCGLRFAYKHVRDKHEKTGKHVFTHGDFEEADEQFRSRPRGGRKRVCPTVEMLVRKRVTPPSQLENLLFMQE* | 364 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy1g0146 | 363 | SUPERFAMILY | beta-beta-alpha zinc fingers | 77 | 129 | IPR036236 | - | |
Ahy1g0146 | 363 | Gene3D | Classic Zinc Finger | 123 | 158 | - | - | |
Ahy1g0146 | 363 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 128 | 151 | IPR013087 | - | |
Ahy1g0146 | 363 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 257 | 280 | IPR013087 | - | |
Ahy1g0146 | 363 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 69 | 96 | IPR013087 | - | |
Ahy1g0146 | 363 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 126 | 156 | IPR013087 | - | |
Ahy1g0146 | 363 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 97 | 126 | IPR013087 | - | |
Ahy1g0146 | 363 | SUPERFAMILY | beta-beta-alpha zinc fingers | 236 | 290 | IPR036236 | - | |
Ahy1g0146 | 363 | Pfam | Zinc finger, C2H2 type | 165 | 189 | IPR013087 | - | |
Ahy1g0146 | 363 | Pfam | Zinc finger, C2H2 type | 70 | 91 | IPR013087 | - | |
Ahy1g0146 | 363 | Pfam | Zinc finger, C2H2 type | 97 | 121 | IPR013087 | - | |
Ahy1g0146 | 363 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 165 | 194 | IPR013087 | - | |
Ahy1g0146 | 363 | PANTHER | - | 12 | 354 | - | - | |
Ahy1g0146 | 363 | SUPERFAMILY | beta-beta-alpha zinc fingers | 124 | 152 | IPR036236 | - | |
Ahy1g0146 | 363 | Gene3D | Classic Zinc Finger | 283 | 309 | - | - | |
Ahy1g0146 | 363 | SUPERFAMILY | beta-beta-alpha zinc fingers | 159 | 190 | IPR036236 | - | |
Ahy1g0146 | 363 | Gene3D | Classic Zinc Finger | 10 | 97 | - | - | |
Ahy1g0146 | 363 | PANTHER | ZINC FINGER PROTEIN | 12 | 354 | - | - | |
Ahy1g0146 | 363 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 288 | 312 | IPR013087 | - | |
Ahy1g0146 | 363 | SMART | c2h2final6 | 69 | 91 | IPR013087 | - | |
Ahy1g0146 | 363 | SMART | c2h2final6 | 126 | 151 | IPR013087 | - | |
Ahy1g0146 | 363 | SMART | c2h2final6 | 97 | 121 | IPR013087 | - | |
Ahy1g0146 | 363 | SMART | c2h2final6 | 24 | 47 | IPR013087 | - | |
Ahy1g0146 | 363 | SMART | c2h2final6 | 197 | 222 | IPR013087 | - | |
Ahy1g0146 | 363 | SMART | c2h2final6 | 225 | 246 | IPR013087 | - | |
Ahy1g0146 | 363 | SMART | c2h2final6 | 255 | 280 | IPR013087 | - | |
Ahy1g0146 | 363 | SMART | c2h2final6 | 286 | 312 | IPR013087 | - | |
Ahy1g0146 | 363 | SMART | c2h2final6 | 165 | 189 | IPR013087 | - | |
Ahy1g0146 | 363 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 71 | 91 | IPR013087 | - | |
Ahy1g0146 | 363 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 255 | 285 | IPR013087 | - | |
Ahy1g0146 | 363 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 99 | 121 | IPR013087 | - | |
Ahy1g0146 | 363 | Gene3D | Classic Zinc Finger | 159 | 190 | - | - | |
Ahy1g0146 | 363 | Gene3D | Classic Zinc Finger | 193 | 277 | - | - | |
Ahy1g0146 | 363 | Gene3D | Classic Zinc Finger | 98 | 122 | - | - | |
Ahy1g0146 | 363 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 167 | 189 | IPR013087 | - | |
Ahy1g0146 | 363 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 199 | 222 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy1g0146 | Ahy-Chr1 | 2162123 | 2166491 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy1g0146 | 93 | 315 | C2H2 Transcription Factor Family | AT1G72050 | 51.812 | 4.52e-93 | 279 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Ahy1g0146 | zf-C2H2 | 0.0028 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy1g0146 | K09191 | - | gmx:100801812 | 555.829 |