Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0110 ATGAAGAACACTTTTGCTCTTTGTTCTTATTTACTCCTCCTTGTTACCCTTTTGGGTCTAGTATTCTCAAATTGCAAAGCCAACCAAGTTGACAACCTTGATGAGTTGATTAATTCAAGAAGCTCAGAGAATGCTCCTAAGACTCTTTCATGGACAAAAGAAGATGCATACATACCAAAATATTATCATACTTCTTCTATTGGTCCATCTCCATCACAAGAGGAGCAAAAGTTGGCTGATAAAATAACTGCATTGCCAGGTCAACCATATTATGGGTCAAATTTTGACCAATATGCAGGGTATGTTACTGTTGATCCAAATGTTGGGAGAGATCTTTTCTATTATTTTGTGGAGTCTCCAGCTAATTCCTCTCAGTACAACCCTTTGGTTTTGTGGCTCAATGGAGGACCTGGTTGCTCCTCACTGGGTTACGGTGCATTTGAGGAGTTGGGACCCTTCAGAGTCAACCCTGATGGTCAAACCCTATACCGCAACCAATTTTCCTGGAACGAAGTGGCTAATGTTCTGTTCTTGGAATCCCCTGCTGGAGTGGGATTCTCGTACACACAAAATGACTCACAAACATTTTTCCCTACTTCCGGTGACAAGGCTGCTGCAAAGGATGCCTACGTGTTCCTGGTTAACTGGCTAGACCGGTTTCCAGAGTACAAAGACCGTGAAATTTACATCACTGGCGAGAGCTATGCCGGTCACTATGTGCCTCAGCTTGCATATACTATTGTTGTCAACAATCTTTTCAGACAAATTGCCAACCAATCTGTTATCAACCTTCAAGGCATTGCTATTGGGAACCCATGGGTTGATGATTTTACTGGTGTAAAGGGGTTATTTGATTACCTCTGGACTCATGCTTTGAACTCAGACCAAACTCATGAGCTCATTGAGACATACTGTGACTTCAAACCCCATCAACCCATTTCCTCTATTTGTATCAATGCAACAAGAAATGCCTTCGCTGAGAAAGGACCCATTGACTCCTATAATATATACGCACCACTCTGTCACGACACCTCTCTCAAACCTTCTCAAACTGGCTCTGTAAGTTATAATTTCGACCCATGCTCTGATGTGTACGTGCAAGCCTATCTAAATAGGCCAGAGGTCCAAGAAGCTCTTCATGCAAAACCCACACAATGGAGCCACTGCAGTTTTTTTCAGTGGAAGGACAGCCCAGTTACAGTCCTACCCCTCATCAAGAAGCTCATCGACCACAATATTAATGTCTGGATATACAGTGGTGATGTAGATTCAAGAGTGTCAGTCACAGCTACCAGATATGCACTCAACGTCCTCAAGCTCCCTATTGTGACCCCTTGGTATCCATGGTATTCTGAAAACGAGATTGGAGGATATGCGGTGCAATACAAAGGATTGGTATTTGCGACAGTGAGAGGAGCAGGGCATATGGTTCCAAGCTGGCAGCCAGAACGGGCTTTCAACTTGATCTTAGCATTCCTCAGTGGATATCCCTCCCCTCCTGGTTCACCAAAATGA 1515 0.437 MKNTFALCSYLLLLVTLLGLVFSNCKANQVDNLDELINSRSSENAPKTLSWTKEDAYIPKYYHTSSIGPSPSQEEQKLADKITALPGQPYYGSNFDQYAGYVTVDPNVGRDLFYYFVESPANSSQYNPLVLWLNGGPGCSSLGYGAFEELGPFRVNPDGQTLYRNQFSWNEVANVLFLESPAGVGFSYTQNDSQTFFPTSGDKAAAKDAYVFLVNWLDRFPEYKDREIYITGESYAGHYVPQLAYTIVVNNLFRQIANQSVINLQGIAIGNPWVDDFTGVKGLFDYLWTHALNSDQTHELIETYCDFKPHQPISSICINATRNAFAEKGPIDSYNIYAPLCHDTSLKPSQTGSVSYNFDPCSDVYVQAYLNRPEVQEALHAKPTQWSHCSFFQWKDSPVTVLPLIKKLIDHNINVWIYSGDVDSRVSVTATRYALNVLKLPIVTPWYPWYSENEIGGYAVQYKGLVFATVRGAGHMVPSWQPERAFNLILAFLSGYPSPPGSPK* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0110 504 Gene3D - 361 391 - -
Ahy1g0110 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 188 IPR001563 GO:0004185|GO:0006508
Ahy1g0110 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 177 IPR001563 GO:0004185|GO:0006508
Ahy1g0110 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 465 478 IPR001563 GO:0004185|GO:0006508
Ahy1g0110 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 216 241 IPR001563 GO:0004185|GO:0006508
Ahy1g0110 504 Pfam Serine carboxypeptidase 93 494 IPR001563 GO:0004185|GO:0006508
Ahy1g0110 504 ProSitePatterns Serine carboxypeptidases, serine active site. 230 237 IPR018202 GO:0004185
Ahy1g0110 504 Gene3D - 401 495 - -
Ahy1g0110 504 Gene3D alpha/beta hydrolase 77 343 IPR029058 -
Ahy1g0110 504 SUPERFAMILY alpha/beta-Hydrolases 80 498 IPR029058 -
Ahy1g0110 504 PANTHER CARBOXYPEPTIDASE 22 498 - -
Ahy1g0110 504 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 22 498 IPR001563 GO:0004185|GO:0006508
Ahy1g0110 504 ProSitePatterns Serine carboxypeptidases, histidine active site. 465 482 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0110 Ahy-Chr1 1611706 1618751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0110 369 497 Calmodulin-binding Proteins AT2G22960 30.657 2.30e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0110 K16297 - gmx:100779407 666.766