Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0060 ATGGGGGGCAACTTGGTCATTGCATACATTATTTTATCCTTTTATCCTCTTTTCATTATTGTGCATGGCACTGATAATAAGTTATCATGCAATCAAACTCCATATCCCACTCTATGTAACCATTACATTATTGGCACTACCAATTATTCAATTTCCTCTTCTTATTATTCCTTCCATGACATGGCCCTTAAGGTCACCATGGACCAAGCAATAGTAGCACACAAACTTGTCTCATCAACCATGGAATCCAACGATTTCAAAGACAAGAGAGCCAAGTCCGCATGGGAAGATTGTTTGGAACTCTATGAGAATACAATCTATCAGCTCAACCGTTCAATGAGCTCAAACAATTTAAACGACAGGTTAACATGGCAAAGTGCTTCTATTGCCAATCAACAAACATGCCAAAACGGTTTTCTTGATTCTAACCTTTCATCTCACTACCTAAACTACTTTCCATCCATTTCAACCAACTTATCCAACTTGCTCAGCAACTCTTTGGCCATTACCAATACATTAACGTCCTTCACTTCGTTACCAAAACACCCGGTTGCTCGCGGCGGTCGAAAATTGCTTTCTTTTAATGGCTTCCCAGAGTGGCTATCTCCTTCCGACAGGAGGCTTCTTCAGGCTTTGCCGGGAACGGCGGCACCGAAGGCGGACATTGTGGTGGCACAGGACGGGAGTGGGAATTACAAGAGTGTTTCGGAGGGCGTGGCGGCGGCCGGTAGGGTGAATAAGAATGGTCGAGTGGTTGTGTACGTGAAAGCTGGCGTTTACCGAGAGAGTGTGAACATAAAGGGAGGTATAAAAAATTTGATGATGTTTGGGGATGGTATTGGAGCTACCATTATTACGGGTAGCAAGAATTATGAAGATGGCTCCACCACTGTTGGTTCAGCTACTTTTACGGTGTCGAGTGATGGGTTCATCGCCAGGGACCTGACAATTGAGAACAGTGCTGGCCCACAGAAGCACCAAGCAGTGGCACTTCTTTCCAGCTCCGATCACTCCGTCTTCTACCGCTGTAGCTTCAGAGGCTACCAAGACACCTTATACGTCCTTTCCCAACGCCAATTCTACCGCGACTGCGACATCTACGGCACCATAGATTTCATCTTCGGTGACGCCGTCGCCCTCTTCCAAAACTGCAACATCTTCTTGAGAAAACCAATGAGTAAGCAACAGAACGCAGTCACAGCACAAGGGAGAACCGATCCCAACGAGAACACCGGCATTGTCATCCACAACTGCCGTATCATGGCGGCTTCAGATCTGAAGCCAGTTCAGGGATCTGTGAAGTGCTTCCTCGGGCGGCCGTGGCAGAAGTACTCAAGAACGGTGGTGGTGAAGAGTAGCCTGGACGGTTTGATTGAAGCGGCAGGGTGGATGCCATGGGCGGGAAGCTTTGCCTTGAATACATTGTATTATGGAGAGTATATGAATATTGGAGCTGGTGCTAACACTGCAGGCAGGGTTAAATGGCCTGGCTTTCATGTTATTACCAACCCTTCTGAGGCTTTGAAATTTACTGTTGCTAATTTCTTGGATGGTGGATCCTGGATTCCTGGCACTGGTGTTCCCTTTGAAACTGGCCTTTGA 1602 0.4675 MGGNLVIAYIILSFYPLFIIVHGTDNKLSCNQTPYPTLCNHYIIGTTNYSISSSYYSFHDMALKVTMDQAIVAHKLVSSTMESNDFKDKRAKSAWEDCLELYENTIYQLNRSMSSNNLNDRLTWQSASIANQQTCQNGFLDSNLSSHYLNYFPSISTNLSNLLSNSLAITNTLTSFTSLPKHPVARGGRKLLSFNGFPEWLSPSDRRLLQALPGTAAPKADIVVAQDGSGNYKSVSEGVAAAGRVNKNGRVVVYVKAGVYRESVNIKGGIKNLMMFGDGIGATIITGSKNYEDGSTTVGSATFTVSSDGFIARDLTIENSAGPQKHQAVALLSSSDHSVFYRCSFRGYQDTLYVLSQRQFYRDCDIYGTIDFIFGDAVALFQNCNIFLRKPMSKQQNAVTAQGRTDPNENTGIVIHNCRIMAASDLKPVQGSVKCFLGRPWQKYSRTVVVKSSLDGLIEAAGWMPWAGSFALNTLYYGEYMNIGAGANTAGRVKWPGFHVITNPSEALKFTVANFLDGGSWIPGTGVPFETGL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0060 533 ProSitePatterns Pectinesterase signature 2. 366 375 IPR033131 -
Ahy1g0060 533 Gene3D - 215 533 IPR012334 -
Ahy1g0060 533 Pfam Plant invertase/pectin methylesterase inhibitor 29 169 IPR006501 GO:0004857
Ahy1g0060 533 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 20 532 - -
Ahy1g0060 533 SMART PMEI_2 21 169 IPR006501 GO:0004857
Ahy1g0060 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 174 IPR035513 -
Ahy1g0060 533 CDD PMEI-like_3 28 145 - -
Ahy1g0060 533 SUPERFAMILY Pectin lyase-like 215 531 IPR011050 -
Ahy1g0060 533 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 174 IPR006501 GO:0004857
Ahy1g0060 533 Pfam Pectinesterase 221 518 IPR000070 GO:0030599|GO:0042545
Ahy1g0060 533 PANTHER PECTINESTERASE 20 532 - -
Ahy1g0060 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 174 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0060 Ahy-Chr1 988693 991114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0060 29 533 Carbohydrate Esterase AT1G23200 53.208 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0060 - - lja:Lj4g3v3099630.1 718.383