Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0058 ATGGGTTGGTTTACCAAGTTGCTTAAGGGATCCAACCATAAATCTTCGAGAGGAAAATATCATGGGAAACATGATAATTCCATGGATGATTTGACAGATGTTGAGAGAGAAGAAATTGATCGTGCAATTGCGCTCTCTCTTTCGGAGGAAGATCCGAAAGGGAAAAAAGTAATTGAGGACGACCCTCAATCTTCTGATGATGAACAACTCTGTGAACTTACTGATGAAGATGAATATCATGGTGAAGTTGAACAACATGAAGAATTAAGTAATCATCACAAAGAGGAAGATGAATCTGTTGGTGAAGTTGAGGAAGAGGAAGATGACCATCTTAATAACATTCAACAGGATAATGACAAGCATCTTGCAGAAGCGCAGCTTGAGGAAGATGAACAACTTGCCAGAGCACTTCAAGAAAGTTTGAACATTGATTCAGACAGAGCTGAAAGAGATTCTTTATTTCAACCATTTCCACACCTCCTTCGACCTGTATACAGAACCTGTGCTGGCTGCAATTCAGAGATTGGCCATGGCAGATTTTTGAGTTGCATGGGAGGTGTCTGGCATCCAGAATGTTTCTGTTGCCATGCTTGTAATTTGCCAATCACTGATTATGAGTTTTCCATGTCTGGAAATCGTCGTTACCATAAATCTTGCTACAAGGAGCTGCATCACCCAAGATGTGATGTTTGCAAGAACTTCATCCCACCAAATTCAGCTGGACTCATTGAGTATAGAGCACATCCTTTCTGGATGCAGAAATACTGTCCTTCACATGAGCGTGATGGAACTCCTCGTTGTTGTAGCTGCGAAAGAATGGAGTCAAGGGATACAAAGTATCTTTTGCTCGATGACGGTCGAAAGTTGTGCCTAGAGTGTCTAGACTCGGCTATTATGGATACGCATGAATGCCAGCCTCTCTATCTTGAAATACAAGAATTCTATGAAGGTTTAAATATGAAAATAGAACAGCAAGTTCCAATGCTTTTAGTTGAGAGACAAGCACTCAACGAGGCCATGGAGGGAGAAAAGAATGGTCATCACCACTTACCGGAAACAAGAGGACTTTGCTTGTCGGAAGAGCAAACTGTCGCCACTATTTTAAGGAGACCAAGGATAGGGGCAGGATACCGAGTCATAGATATGATAACTGAGCCTTACAGGCTAATCCGCCATTGCGAAGTGACAGCCATACTTGTTTTGTATGGCCTTCCTAGGTTATTGACGGGTTCAATCCTGGCCCATGAGATGATGCATGCTTGGCTTAGGCTTAAAGGCTATGGCAATTTAAGGCCAGAAGTTGAAGAAGGAATTTGCCAAGTGCTAGCTCACATGTGGCTAGATTCAGAGATCTATGCTGGTTCAGGAAGTGATAGTGCATCATCGTCCTCGGCCTCATCCTCATCCTCATCCTCGCCTTCCTCTTCTACATCATCAAAGAAGGGTAAACGGTCTGACTTCGAGAAGAAACTTGGCGAGTTTTTCAAACACCAGATTGAGTCCGATCGCTCATCGGCTTATGGAGATGGATTCAGAGAGGGGAACCAAGCTGTGCTCAAGTATGGTTTAAGAAGTACCCTTGATCATATTCGACTAACCGGAAGTTTTCCATACTGA 1617 0.4304 MGWFTKLLKGSNHKSSRGKYHGKHDNSMDDLTDVEREEIDRAIALSLSEEDPKGKKVIEDDPQSSDDEQLCELTDEDEYHGEVEQHEELSNHHKEEDESVGEVEEEEDDHLNNIQQDNDKHLAEAQLEEDEQLARALQESLNIDSDRAERDSLFQPFPHLLRPVYRTCAGCNSEIGHGRFLSCMGGVWHPECFCCHACNLPITDYEFSMSGNRRYHKSCYKELHHPRCDVCKNFIPPNSAGLIEYRAHPFWMQKYCPSHERDGTPRCCSCERMESRDTKYLLLDDGRKLCLECLDSAIMDTHECQPLYLEIQEFYEGLNMKIEQQVPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTVATILRRPRIGAGYRVIDMITEPYRLIRHCEVTAILVLYGLPRLLTGSILAHEMMHAWLRLKGYGNLRPEVEEGICQVLAHMWLDSEIYAGSGSDSASSSSASSSSSSSPSSSTSSKKGKRSDFEKKLGEFFKHQIESDRSSAYGDGFREGNQAVLKYGLRSTLDHIRLTGSFPY* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0058 538 Gene3D Cysteine Rich Protein 164 225 - -
Ahy1g0058 538 MobiDBLite consensus disorder prediction 79 99 - -
Ahy1g0058 538 ProSitePatterns LIM zinc-binding domain signature. 168 202 IPR001781 -
Ahy1g0058 538 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 195 253 - -
Ahy1g0058 538 MobiDBLite consensus disorder prediction 458 484 - -
Ahy1g0058 538 PANTHER PROTEIN DA1-RELATED 2 1 88 IPR045218 -
Ahy1g0058 538 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 128 147 IPR003903 -
Ahy1g0058 538 MobiDBLite consensus disorder prediction 21 63 - -
Ahy1g0058 538 SMART uim 34 53 IPR003903 -
Ahy1g0058 538 SMART uim 128 147 IPR003903 -
Ahy1g0058 538 Pfam LIM domain 168 222 IPR001781 -
Ahy1g0058 538 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 164 193 - -
Ahy1g0058 538 PANTHER PROTEIN DA1-RELATED 2 87 538 IPR045218 -
Ahy1g0058 538 MobiDBLite consensus disorder prediction 64 78 - -
Ahy1g0058 538 MobiDBLite consensus disorder prediction 1 109 - -
Ahy1g0058 538 MobiDBLite consensus disorder prediction 458 480 - -
Ahy1g0058 538 PANTHER TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LIM FAMILY-RELATED 87 538 - -
Ahy1g0058 538 PANTHER TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LIM FAMILY-RELATED 1 88 - -
Ahy1g0058 538 Pfam Protein DA1 317 533 IPR022087 -
Ahy1g0058 538 ProSiteProfiles LIM domain profile. 166 226 IPR001781 -
Ahy1g0058 538 SMART lim_4 167 219 IPR001781 -
Ahy1g0058 538 Coils Coil 111 140 - -
Ahy1g0058 538 CDD LIM_DA1 168 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0058 Ahy-Chr1 928866 935787 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy1g0058 DA1-like 2.30E-106 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0058 - - gmx:100806605 865.914