Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0021 ATGGATCGGGCGGCGGTTACCGTCGGACCCGGCATGGACATGCCGATCATGCACGACAGCGACCGTTACGATCTGGTCCGTAACATTGGGTCCGGAAACTTCGGCATCGCAAGATTGATGCAGGATAAGCAGACCAAGGAGCTCGTTGCTGTTAAATATATCGAACGCGGCGACAAGATTGATGAAAATGTCAAGAGAGAAATCATTAATCACAGGTCTTTGAGACACCCTAACATTGTTAGGTTTAAGGAGGTTATTTTAACACCTACGCATCTGGCCATTGTAATGGAATATGCATCTGGAGGAGAACTGTTTGAGCGAATCTGCAATGCTGGGCGCTTCTCTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTACTGCCATGCAATGCAAGTTTGTCACCGGGACCTGAAGTTGGAGAACACTTTGCTGGATGGAAGCCCAGCACCACGTTTGAAGATATGCGATTTTGGCTACTCCAAGTCTTCGGTGCTTCATTCACAACCAAAGTCAACAGTCGGCACTCCTGCTTATATAGCTCCAGAAGTATTGCTGAAGCAAGAGTATGATGGCAAGATTGCAGATGTCTGGTCGTGTGGAGTAACTTTATATGTGATGCTAGTGGGAGCATATCCTTTTGAAGATCCTAGTGAACCAAAGGATTTCAGGAAGACAATTCAGAGAATTCTCAGTGTCCAGTATTCCATTCCAGACTTTGTTCAGATATCTCCTGAATGTCGCCACCTTATCTCAAGGATCTTTGTTTTTGACCCTGCAGAGAGAATCACGATGTCTGAGATCTGGAACCATGAATGGTTTTTGAAGAATCTGCCGACAGATCTGATGGATGAGAAGATAATGGGCAACCAATTTGAAGAGCCAGACCAACCAATGCAGAGCATTGATACGATCATGCAGATAATATCAGAAGCTACCATACCAGCAGCTGGGGCCTATTCCTTAGACCAGTTTATGGCAGATAACATTGACATGGATGATGACATAGATGAATTAGAATCCGAATCTGAGCTTGATATAGATAGCAGTGGGGAGATAGTGTATGCCATATAA 1089 0.45 MDRAAVTVGPGMDMPIMHDSDRYDLVRNIGSGNFGIARLMQDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGAYPFEDPSEPKDFRKTIQRILSVQYSIPDFVQISPECRHLISRIFVFDPAERITMSEIWNHEWFLKNLPTDLMDEKIMGNQFEEPDQPMQSIDTIMQIISEATIPAAGAYSLDQFMADNIDMDDDIDELESESELDIDSSGEIVYAI* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0021 362 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g0021 362 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 14 356 - -
Ahy1g0021 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Ahy1g0021 362 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g0021 362 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Ahy1g0021 362 Coils Coil 327 347 - -
Ahy1g0021 362 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
Ahy1g0021 362 SUPERFAMILY Protein kinase-like (PK-like) 16 314 IPR011009 -
Ahy1g0021 362 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Ahy1g0021 362 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g0021 362 PANTHER SERINE/THREONINE KINASE 14 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0021 Ahy-Chr1 277428 284213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0021 16 289 CBL-interacting serine-threonine protein kinases AT4G24400 42.756 9.20e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Ahy1g0021 Pkinase 3.70E-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0021 K14498 - gmx:100806949 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0885 11 17150895 17157140 Ahy1g0021 1 277428 284213 hybridization
Ahy1g0021 1 277428 284213 Ahy15g0681 15 9166942 9171639 PCT