Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0016 ATGTCATCGACGCCTACACCATGCGCGGCATGCAAGTTCCTTCGTCGGGAGTGCACACCGGAGTGCATTTTCGCACCGTACTTCCCAGCGAACAACCCAGAGCGCTTCGAATGCGTCCACCGCGTCTTCGGCGCCAGCAACGTCGGCAATATCCTCAACGCGCTACCTCCATCCCAGCGCGAGGATGCGGCGAAGTCCTTTGCGTTCCAGGCGGAGGCAAGCCTCCGCAGCCCGGTCTATGGCTGCACCCTCCAAGTCCCCAAGAGAGAACCTAGTGCCTCCATGAACCCACAAGCCATTCAAGGTCCATTCAACCCTCAGGAAAAGCCTCTGTCTTCACCTCCCGCCCATTTAGGCCCTCCCTGCGGCCCAAATGTTGTACAGTATTCAGCTCATTTAGGCCCATTTAAGCAAGAGATGTTGCAGGCTCAAGAACTTGACTTGTTGCAGGCCCAAGAACTTGCTGCTGCTAAGCAAGTTAAGATGGAAGTTAAGATGGAACCTGTTGCTGGGATTGAACCTGCTGCGGCTGCGGCGCCCTACGGCGGTGACATCCGTAGAAGTGAAGTGTTTGGCCTCATGCGGCAAATTCAAGTATTGTTTCAACAACAAAAACATCAAATACGACAACTATTACAACAACATCGACGAGAACTACAAGTATTACAACATCGAATAGAACTACGAGTATTACAACAAAAACAACAACAACAGCACCAGCAGCAACCACTACAACAACAGAGAGAAGACAAATGA 756 0.5159 MSSTPTPCAACKFLRRECTPECIFAPYFPANNPERFECVHRVFGASNVGNILNALPPSQREDAAKSFAFQAEASLRSPVYGCTLQVPKREPSASMNPQAIQGPFNPQEKPLSSPPAHLGPPCGPNVVQYSAHLGPFKQEMLQAQELDLLQAQELAAAKQVKMEVKMEPVAGIEPAAAAAPYGGDIRRSEVFGLMRQIQVLFQQQKHQIRQLLQQHRRELQVLQHRIELRVLQQKQQQQHQQQPLQQQREDK* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0016 251 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 4 243 - -
Ahy1g0016 251 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Ahy1g0016 251 MobiDBLite consensus disorder prediction 89 107 - -
Ahy1g0016 251 Pfam Lateral organ boundaries (LOB) domain 7 86 IPR004883 -
Ahy1g0016 251 MobiDBLite consensus disorder prediction 89 116 - -
Ahy1g0016 251 Coils Coil 205 225 - -
Ahy1g0016 251 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0016 Ahy-Chr1 204586 207424 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0016 2 83 AS2 family AT1G65620 65.854 2.13e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy1g0016 LOB 1.30E-31 No_clan