Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0012 ATGTCATCAACGAATTCGCCATGCGCGGCGTGCAAGTTCCTTCGTCGGAAGTGCACACAAGAGTGCATTTTCGCACCATACTTCCCACCAGACAACCCACAGCGCTTCGCATGCGTCCATCGCGTCTTCGGAGCCAGCAACATCGGCAAGATCCTCAACGATCTTAGCCCCTGCCAGCGGGAAGATGCGGTGAAGTCCCTTGCATTCGAGGCGGAGGCTCGCATTCGCAGCCCAGTGTACGGGTGCGTCGGCCACATCGTCTTCCTCCAACAGCACCTGCAGCAAATACAAATGGACCTCCTCAACGCCAAGACCGAACTCAGCGCCTACATCAGCTCACAAGGCATTCAAGGTCCGTTCTCCCCTCATGGAATTCGAGCGCTCCCACTTTACCCTCAAGGAAAGCCGCCGCCCTCGTCTGCGGCTCTTTTTGGCCCGCCTTACGGCCCAAATGTTATTCAGTCTTTGATGCCACCATCTTCTGTGCAGCATAATGGACCAATGAATGCTAATGCCGACCTGAATCCAGAGCAGCGCGAGTTGTTGGAACAGCAACATGACATGATGGTGAGAAACTATGAACAGCAGCAGCAGGAGTATCTAAGATACAACGCTGCTACTGGGATTGAACCTGTGGCAGCTGGAAGTCCGGTTTCAGTTGTCACAGCCGATGGCGATGGCGGTGGAAGTGGAGTTTTTGGCCAGATGGTTGCACATTCAGGCGGTCAAGGAGGTGAGCTGGCACCTTGTTTGGGTTTGGGGACATTTGACAGTGCTGGAACTTATCATCATCAGTTGCAACAACAACCACCACAACATGGAGGAGTAGGTGAAAATTATGTTGGTCTTGTAAATCATCATCACTATCCTGTTGAGGCGCAATTTCTGCTCCCATCACAACAACAACAACCGTCAGAGAGTGAGGACTGTAAGAGTGTCGGCCCTTCTTCATGA 954 0.5262 MSSTNSPCAACKFLRRKCTQECIFAPYFPPDNPQRFACVHRVFGASNIGKILNDLSPCQREDAVKSLAFEAEARIRSPVYGCVGHIVFLQQHLQQIQMDLLNAKTELSAYISSQGIQGPFSPHGIRALPLYPQGKPPPSSAALFGPPYGPNVIQSLMPPSSVQHNGPMNANADLNPEQRELLEQQHDMMVRNYEQQQQEYLRYNAATGIEPVAAGSPVSVVTADGDGGGSGVFGQMVAHSGGQGGELAPCLGLGTFDSAGTYHHQLQQQPPQHGGVGENYVGLVNHHHYPVEAQFLLPSQQQQPSESEDCKSVGPSS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0012 317 MobiDBLite consensus disorder prediction 298 317 - -
Ahy1g0012 317 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Ahy1g0012 317 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Ahy1g0012 317 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 1 204 - -
Ahy1g0012 317 Coils Coil 179 199 - -
Ahy1g0012 317 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0012 Ahy-Chr1 176892 178436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0012 1 234 AS2 family AT5G66870 45.122 2.92e-58 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy1g0012 LOB 5.90E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0012 - - aip:110262357 550.051