Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0009 ATGTCATCCACGAATTCGCCATGCGCGGCGTGCAAGTTCCTTCGTCGGAAGTGCACACAAGAGTGCATTTTCGCACCATATTTCCCGCCGGACAACCCACAGCGCTTCGCAAGCGTCCATCGCGTCTTCGGCGCCAGCAACATCGGCAAGATCCTCAACGATCTTAGCCCCTGCCAGCGGGAAGATGCGGTGACGTCCCTTGCGTTCGAGGCGGAGGCGCGCCTCGACAGCCCAGTGTACGGGTGCGTCAGACACATCGTCATCCTCCAACAGCGCCTGCACCAAATACAAATGGACCTCCTCCACGCCAAGAGCGAACTCAGCGCCTACATCAACCCACAAGGCATTCAGGGTCCGTTCTCCCCTCATGGAATTCGAGGGCTACCACTTTACCCTCAAGGAAAGCCGCCGTCTTCGTCTGCGGCTCTTTTCGGCCCGCCTTACGGCCCAAATGTTATTCAGTCTTTGATGCCACCATCTTCTGTGCAGCATAATGGAACAATGAATGCTAATGCCGACCTGGATCCAGAGCAGCGCGAGTTGTTGGAGGCCCAACAACTCGCAGCACAGCAACATGACATGATGGTCAGAAACTATGAACAGCAGCAGCAGCAGCAGGAGTATCTAAGATACAACGCTGCTACTGGGATTATTGAACCTGTGGCAGCTGCAAGTCCGGTTTCAGTTGTCACAGCCGACGGTGATGGCCGTGGAAATGGAGTTTTTGCCCAGATGGCTGCACATTCAGGCGGTCAAGGAGGTGAGCTGACACCTTGTTTGGGTTTGGGGACATTTGACAGTGGTGGAACTTATCACCATCAGTTGCAACAAGAACCACCACAACATGGAGGAGTAGGGGAAAATTATGTTGGTCTTGCAAATCGTCATCACTATCCTGTTGAGGCGCAATTCCTGCTCCCATCACAACAACAACAGTCAGAGAGTGAGGACTGTAAGAGTGTCGGCCCTTGTTGA 975 0.5385 MSSTNSPCAACKFLRRKCTQECIFAPYFPPDNPQRFASVHRVFGASNIGKILNDLSPCQREDAVTSLAFEAEARLDSPVYGCVRHIVILQQRLHQIQMDLLHAKSELSAYINPQGIQGPFSPHGIRGLPLYPQGKPPSSSAALFGPPYGPNVIQSLMPPSSVQHNGTMNANADLDPEQRELLEAQQLAAQQHDMMVRNYEQQQQQQEYLRYNAATGIIEPVAAASPVSVVTADGDGRGNGVFAQMAAHSGGQGGELTPCLGLGTFDSGGTYHHQLQQEPPQHGGVGENYVGLANRHHYPVEAQFLLPSQQQQSESEDCKSVGPC* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0009 324 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Ahy1g0009 324 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-RELATED 1 230 - -
Ahy1g0009 324 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Ahy1g0009 324 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0009 Ahy-Chr1 168598 169572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0009 1 212 AS2 family AT5G66870 48.198 9.33e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy1g0009 LOB 1.10E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0009 - - aip:110262357 605.134