Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3591 ATGGGGGAATCATCGTTGATGCACAAGATCCATGACTCTTCATCGGCATCGTCGTCGTCTAGCTCAGAGGACGAGAAGAGGCCGGCGTTGGCACGCCAAGCCGCCACTGTGAAGGCAAAGGCGAAGGAGAAGGCGATCCATTACAAGGCGGAGGTTAACCGCCTCTTCGGCCGCGAACAGCCCGTCCACAAGGTCTTGGGAGCTGGAAAGGCGGCTGATATATTCCTATGGAGGAACAAGAGAAGCTCAGGGATGGTACTTGGTGCCGGCACCATGTTGTGGTTTTTCTTCGAGAGAATGGAGTACCACCTCATCACTTTCATTTGCCATTTCCTCATTGTATCTCTCGCAGCTCTTTTCTTGTGGTCCAATGCTTCTGTCTTTATACACAAGGCCCCCGTGCAAGTTCCACAAGTCGCAATCCCCGAGGATTGCCTTATTCACATAGTCAAAGCTCTGAGATTTGAAATTAACAGAGCCTTCCTTCTTCTCCGAGAAATTGGAACTGGCCGAGATATCAAAAAATTCCTTACCGTTGTTGGTATATTGTGGCTCATCTCACTTGTTGGGAGCTGCTTCAACTTCCTCACCTTGTTTTACTTATGCTTTCTATTACTGTTCACATTGCCACTGGTGTATGAGAAAAATGAAGACCAGATTGATGCACTAGCAGAGAAGGCAATGATTGAGATCAAGAAGCAATATGCGGTGCTAGATGCTAAGGTCTTGAGCCAGATACCAGTGGCCGGGTTCAAAAAGGATTAA 765 0.4797 MGESSLMHKIHDSSSASSSSSSEDEKRPALARQAATVKAKAKEKAIHYKAEVNRLFGREQPVHKVLGAGKAADIFLWRNKRSSGMVLGAGTMLWFFFERMEYHLITFICHFLIVSLAALFLWSNASVFIHKAPVQVPQVAIPEDCLIHIVKALRFEINRAFLLLREIGTGRDIKKFLTVVGILWLISLVGSCFNFLTLFYLCFLLLFTLPLVYEKNEDQIDALAEKAMIEIKKQYAVLDAKVLSQIPVAGFKKD* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3591 254 Pfam Reticulon 72 227 IPR003388 -
Ahy19g3591 254 ProSiteProfiles Reticulon domain profile. 71 254 IPR003388 -
Ahy19g3591 254 MobiDBLite consensus disorder prediction 8 24 - -
Ahy19g3591 254 PANTHER RETICULON-LIKE PROTEIN 7 252 - -
Ahy19g3591 254 PANTHER RETICULON 7 252 IPR045064 GO:0009617
Ahy19g3591 254 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3591 Ahy-Chr19 158518560 158520156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3591 - K20721 gmx:100790190 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2696 17 124530916 124533603 Ahy19g3591 19 158518560 158520156 ECH
Ahy12g0192 12 3143916 3146536 Ahy19g3591 19 158518560 158520156 ECH
Ahy13g2772 13 106975836 106977994 Ahy19g3591 19 158518560 158520156 ECH
Ahy19g3591 19 158518560 158520156 Ahy19g3591 19 158518560 158520156 ECH
Ahy19g3591 19 158518560 158520156 Ahy9g2024 9 108572272 108573741 hybridization