Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3583 ATGGTATCGAAGAACCCGAACCCCTCAGAGGGATTCTACCTCGATCCCAGTGCGCTCCCCAGCCTCGTTCCGTTGGCCGCAACCACGGGGGCGTCCACCGCCAACTCGGCGGAGGACCCCGCCAAGAAGACGCGGAAGCCATACACTATAACTAAATCTAGAGAGAGCTGGACCGAACCCGAGCACGACAAGTTCCTCGAAGCTCTTCAACTGTTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCGAAGACAGTTATCCAGATACGTAGCCATGCACAGAAATACTTTCTAAAAGTTCAGAAGAGCGGGACAAGTGAACATCTTCCTCCACCCAGACCAAAACGAAAAGCCGCTCATCCATATCCTCAGAAAGCTTCTAAAAATGCACCAGTACTCGCGCAAGTATCTGGATCATTTCAGTCTTCATCTGCTTTGCTTGAATGTGGACATGTCCTGCAGCCTGATTCTTCAGCAATGCTTAAAACACCTATTGTTAGCGCTGCGGTGTCTTCCTGGTCAAACAACACCCTGCAGCAAAAAGCCAATGCATTGCATGGGCAAAAAGTAAATAACTGTTGTAGTAGCAGCGAAAGCACTCCCAGAGCACAAGCACCTGGTGAATCTAATGTTCAAGGGAACAATAGCCATCCTTTGAGAGTTCTTCCGGATTTCACTCAAGTGTACCGCTTCATTGGCAGTGTATTTGACCCAAGCATAACTGGGCATCTACAGAAACTAAAAAGGATGGATCCTATAGATGTTGAAACGGTGCTACTACTGATGAGAAATCTGTCTATCAATTTAAGGAGCCCAGATTTTGAGGATCATAGAAGGTTGCTTGCCTCGTATGAGGTGGAACTCGAAACAGACAGCTACATCAATGCAGATAGACCTATGACTGGTGGGCAGTTGAAGACAGCTACTTAG 936 0.4733 MVSKNPNPSEGFYLDPSALPSLVPLAATTGASTANSAEDPAKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPVLAQVSGSFQSSSALLECGHVLQPDSSAMLKTPIVSAAVSSWSNNTLQQKANALHGQKVNNCCSSSESTPRAQAPGESNVQGNNSHPLRVLPDFTQVYRFIGSVFDPSITGHLQKLKRMDPIDVETVLLLMRNLSINLRSPDFEDHRRLLASYEVELETDSYINADRPMTGGQLKTAT* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3583 311 MobiDBLite consensus disorder prediction 39 57 - -
Ahy19g3583 311 SUPERFAMILY Homeodomain-like 48 104 IPR009057 -
Ahy19g3583 311 MobiDBLite consensus disorder prediction 30 57 - -
Ahy19g3583 311 CDD SANT 56 99 IPR001005 -
Ahy19g3583 311 ProSiteProfiles SANT domain profile. 52 103 IPR017884 -
Ahy19g3583 311 MobiDBLite consensus disorder prediction 104 131 - -
Ahy19g3583 311 Pfam Myb-like DNA-binding domain 54 99 IPR001005 -
Ahy19g3583 311 Gene3D - 57 104 - -
Ahy19g3583 311 PANTHER PROTEIN REVEILLE 6 3 294 - -
Ahy19g3583 311 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 52 101 IPR006447 GO:0003677
Ahy19g3583 311 ProSiteProfiles Myb-like domain profile. 49 99 IPR001005 -
Ahy19g3583 311 MobiDBLite consensus disorder prediction 195 218 - -
Ahy19g3583 311 PANTHER SWI/SNF COMPLEX-RELATED 3 294 - -
Ahy19g3583 311 SMART sant 53 101 IPR001005 -
Ahy19g3583 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 103 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3583 Ahy-Chr19 158455565 158459719 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy19g3583 Myb_DNA-binding 3.80E-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3583 - - aip:107619038 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3592 15 158664614 158668357 Ahy19g3583 19 158455565 158459719 ECH
Ahy19g3583 19 158455565 158459719 Ahy19g3583 19 158455565 158459719 ECH
Ahy19g3583 19 158455565 158459719 Ahy9g2039 9 108767236 108771289 hybridization