Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3575 ATGCCTATACGGTGGGCAAATCCGTTCTCAAATTCAAAAGAAACCAAGAAGAAAGCAAGTAAGGAAAGTTTTATTGGCACACTGCATCGGAAATTTAAAACACCATCTGAAGGTAGATTAGGCAGTAGATCTGGAGGTCCTGGTAGACGCTGCAATGACACAATTTCAGAGATGGGGGATCGTTCTCCAGCTGAATCAAGATCTCCTTCGCCTTCCAAAGTGGCAAGATGTCAAAGTTTCGCTGAAAGGCCTCATGCTCAGCCATTACCACTTCCTGGTCTTCACCCTTCAAGTATAGGCCGAGTAGATTCTGAAATTAGCATATCATCAAAATCAAGACTGGAAAAGAGCTCCAAGCCATCATTCCTTCCACTTCCAAGACCTGCATGTATGCGAGGAAGGACAAATCCTTCAGATTTGGATGGAGATATGGTTGCTTCAATCTCCAGTGATGGTTCTGCTGATAGTGATGACCAAACAGAGTCACGCAACCGAAGTCCTTTGGCAACTGACACCGATACTGGGACTAGAACTGCTGCCGAGAGTCCTTCCAGCATGATGCTCAAGGATCAACCATCTGTTGTCTCCCAACTAAATTCAAGAGAAGCCAAAAAACCAGTGAACATTCTAAGTAATCATATGTCTTCTACTTCACCAAAACAGAGGCCTTTAAGGAACCATGTTCCGAATCTGCAAGTTCCCCCTCATGGTGCCTTCTATAGTGCTCCAGACAGTTCCTTGTCAAGCCCATCGAGAAGCCCATTGAGAGCGTTTGGCACAGATCAGGTGTTGAACTCTGCCTTCTCGGCTGGAAAGCCATACCCTGAGTTCAATTTAGCCGGTTCTGGCCACTGCTCTAGTCCAGGTTCCGGTCACAATTCTGGGCACAATTCAATGGGTGGGGACATGTCAGGACAGTTATTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCAGTTCCTAGTCCCAGAATGACTAGTCCTGGTCCTAGCTCTAGAATTCAGAGTGGAGCCGTCACACCTATTCATCCTAGAGCTGGGGGAACACCCACTGAATCACAGACAAGCTGGGCTGATGATGGAAAACAACAGAGTCATCGTTTGCCACTTCCTCCTTTGACAATTACCAATTCCTCGCCTTTCTCTCATTCCAATTCTGCAGCAACTTCTCCATCCATGCCAAGAAGTCCAGCTAGAGCGGAAAATCCAGTGAGCCCTGGCTCACGTTGGAAAAAAGGAAAGCTGATTGGCAGAGGCACATTTGGACATGTCTACGTCGGCTTCAATAATGATAGTGGTGAAATGTGTGCAATGAAGGAGGTTACCCTGTTTTCAGATGATGCCAAGTCTTTAGAGAGCGCTAAACAATTAATGCAGGAAATTTCTTTATTAAGTCGGCTTCGGCATCCAAATATTGTGCAGTACTATGGTTCTGAAACGGTAGATGACAAGCTTTACATATACCTGGAGTATGTATCCGGAGGCTCCATATATAAACTTCTTCAAGAATATGGACAGTTTGGTGAACTAGCTATTCGTAATTATACTCAACAAATTTTGTCAGGGCTTGCTTATCTGCATGCTAAGAATACTGTCCACAGGGACATCAAGGGTGCAAATATACTTGTAGATCCAAACGGCCGGGTCAAGTTGGCAGATTTTGGCATGGCAAAACATATAAAAGGGCAATCATGTCCATTGTCAATCAAGGGAAGCCCTTATTGGATGGCTCCTGAGGTTATAAAGAACACTAGTGGATGCAACCTTGCTGTGGATATATGGAGTCTTGGATGCACGGTTTTGGAAATGGCTACAACCAAGCCCCCTTGGAGTCAATACGAAGGGGTTGCTGCCATGTTCAAGATAGGTAATAGCAAGGAACTCCCAAAAATCCCAGATCACCTCTCAAATGAAGGAAAAGATTTTGTAAGGAGATGTCTACAACGTGATCCACATGATCGACCTTCAGCCAGTGAATTGTTGGAGCATGCTTTTGTGAAGTGTGCTGCACCTTTGGAAAGACCTATTCTGGGTCCTGAAGCATCAGACCCTCATCCTGCAATTACACAGGGAACAAAAACTCTGGGTATTGGACAAGGAAGGAATCTTTCTATCTTGGATTCAGATAGACTTGCTGTCCATTCTTCTAGGGCCTTGAAAACTAATCCTCATGCGAGTGACATCCATATTCCAAGAAATATATCTTGCCCTGTCTCTCCCATTGGAAGTCCACTTTTGAGGTCAAGATCACCACAGCACATGAATGGAAGAATGTCACCTTCTCCAATATCTAGTCCACGGACTGCTTCTGGTGCATCGACGCCTCTCACAGGCGGCAACGGTGCCATTCCATTCAGCAACCAATTAAAACAGTCAGTTTACTTTCAAGAGGGTCTTGTAAGCATGCCCAAGTCCCCAAATGGTGTCTACATCAGTGGCTCTGCACATAATGACTCAAATGTTGACATTTTTCGTGGAATGCAAATGGGGTCTCACATTACCTCAGAACTAGTTCCCAGTGAAAATGATATTCTGGGTAAGCAGTTCACAAGGCCATCTCATCCTGAGCCATATGATTTTCAATCAGTCTTGGCGGATCGTGTTGGCCGGCAGCTGCTGCGGGACCACGTGAAGATTAACCCATCCCTTGATCTAAATCCCAACTCCACTTTGCTGAGCCGAGGAAATGGTTTGTAA 2700 0.4541 MPIRWANPFSNSKETKKKASKESFIGTLHRKFKTPSEGRLGSRSGGPGRRCNDTISEMGDRSPAESRSPSPSKVARCQSFAERPHAQPLPLPGLHPSSIGRVDSEISISSKSRLEKSSKPSFLPLPRPACMRGRTNPSDLDGDMVASISSDGSADSDDQTESRNRSPLATDTDTGTRTAAESPSSMMLKDQPSVVSQLNSREAKKPVNILSNHMSSTSPKQRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSRSPLRAFGTDQVLNSAFSAGKPYPEFNLAGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPTESQTSWADDGKQQSHRLPLPPLTITNSSPFSHSNSAATSPSMPRSPARAENPVSPGSRWKKGKLIGRGTFGHVYVGFNNDSGEMCAMKEVTLFSDDAKSLESAKQLMQEISLLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGQFGELAIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHIKGQSCPLSIKGSPYWMAPEVIKNTSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPKIPDHLSNEGKDFVRRCLQRDPHDRPSASELLEHAFVKCAAPLERPILGPEASDPHPAITQGTKTLGIGQGRNLSILDSDRLAVHSSRALKTNPHASDIHIPRNISCPVSPIGSPLLRSRSPQHMNGRMSPSPISSPRTASGASTPLTGGNGAIPFSNQLKQSVYFQEGLVSMPKSPNGVYISGSAHNDSNVDIFRGMQMGSHITSELVPSENDILGKQFTRPSHPEPYDFQSVLADRVGRQLLRDHVKINPSLDLNPNSTLLSRGNGL* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3575 899 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 10 813 - -
Ahy19g3575 899 MobiDBLite consensus disorder prediction 14 37 - -
Ahy19g3575 899 ProSiteProfiles Protein kinase domain profile. 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3575 899 MobiDBLite consensus disorder prediction 348 363 - -
Ahy19g3575 899 MobiDBLite consensus disorder prediction 284 412 - -
Ahy19g3575 899 MobiDBLite consensus disorder prediction 102 117 - -
Ahy19g3575 899 MobiDBLite consensus disorder prediction 59 75 - -
Ahy19g3575 899 MobiDBLite consensus disorder prediction 1 254 - -
Ahy19g3575 899 CDD STKc_MEKK1_plant 410 667 - -
Ahy19g3575 899 SMART serkin_6 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3575 899 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Ahy19g3575 899 Pfam Protein kinase domain 412 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3575 899 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 10 813 - -
Ahy19g3575 899 Gene3D Transferase(Phosphotransferase) domain 1 409 682 - -
Ahy19g3575 899 SUPERFAMILY Protein kinase-like (PK-like) 409 746 IPR011009 -
Ahy19g3575 899 MobiDBLite consensus disorder prediction 370 397 - -
Ahy19g3575 899 MobiDBLite consensus disorder prediction 746 784 - -
Ahy19g3575 899 MobiDBLite consensus disorder prediction 284 313 - -
Ahy19g3575 899 MobiDBLite consensus disorder prediction 165 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3575 Ahy-Chr19 158390664 158397733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3575 9 888 MAP Kinase Kinase Kinase AT1G63700 59.050 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy19g3575 Pkinase 3.60E-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3575 K20717 - gmx:100792783 1413.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3559 15 158353719 158359377 Ahy19g3575 19 158390664 158397733 ECH
Ahy19g3575 19 158390664 158397733 Ahy19g3575 19 158390664 158397733 ECH
Ahy19g3575 19 158390664 158397733 Ahy9g2051 9 109085010 109091999 hybridization
Ahy19g3575 19 158390664 158397733 Ahy15g3559 15 158353719 158359377 PCT
Ahy19g3575 19 158390664 158397733 Ahy5g3149 5 113302816 113308478 PCT