Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3568 ATGGCTCCTAAGCAGCCAAGTTCGGGTCTGTTCGTCGGAATGAACAAAGGTCACATTGTCACCAAGAAGGAGTTGCCTCCACGTCCCAGGGATCGCAAAGGGAAAACAAGCAAGAGGGTGCACTTTGTAAGGAACCTAATCCGTGAGGTTGCTGGTTTTGCACCTTATGAGAAGCGTATTACTGAGTTGCTCAAGGTTGGAAAGGATAAGAGGGCGCTCAAAGTTGCTAAGAGAAAGCTTGGAACCCACAAGCGTGCTAAGAAGAAGAGAGAGGAGATGTCCACCGTTCTCCGCAAGATGAGGGCTGGTGGAGGTGGAGAGAAGAAGAAATGA 333 0.4955 MAPKQPSSGLFVGMNKGHIVTKKELPPRPRDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSTVLRKMRAGGGGEKKK* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3568 110 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Ahy19g3568 110 MobiDBLite consensus disorder prediction 87 110 - -
Ahy19g3568 110 Gene3D 60S ribosomal protein L36 1 105 IPR038097 -
Ahy19g3568 110 MobiDBLite consensus disorder prediction 1 38 - -
Ahy19g3568 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Ahy19g3568 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Ahy19g3568 110 MobiDBLite consensus disorder prediction 80 110 - -
Ahy19g3568 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3568 Ahy-Chr19 158344220 158345191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3568 1 110 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 80.357 2.87e-58 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3568 K02920 - vvi:100262717 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3550 15 158306092 158307793 Ahy19g3568 19 158344220 158345191 ECH
Ahy19g3568 19 158344220 158345191 Ahy19g3568 19 158344220 158345191 ECH
Ahy19g3568 19 158344220 158345191 Ahy9g2059 9 109140222 109141278 hybridization