Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3565 ATGAACATCTTCTTCTTCGTCGCTTTGGTGTTGTTGTGTGTAGTGACAGTAGCAGCTCCATGGCGGGTTGTCTCCGAAGATAATGAAGAACAACACAGGCTTCTGGTGAACATGACTCTCGTTAAGAACGCTCGTGCCGGCGGTGCTCTTTGTTTGGACGGGAGTTTACCGGCTTATCACTTGCATAGGGGATTTGGAGCTGGACTCAATAACTGGCTTCTACAGTTCGAGGGAGGTGGGTGGTGCAATGATTTGCCATCATGCTTGGAGAGAGCAGAGTCTCGCAGGGGCTCAACACGTTACATGACCAAGTTCGAAGTCTTCTCTGGTATTTTAAGCAGCAATGCCTCCCAAAATCCAGACTTCTACAATTGGAACCGTGTTAAGCTGAGATATTGTGATGGAGCTTCATTCACTGGAGATGCTATCTTTGATAATGGGACAACAAGGCTTCATTTCAAAGGGCAAAAGATTTGGGAAGCTATCATTCATGATCTGCTACCAAAAGGTCTAGGAAAGGCACGCAAGGCTTTGCTTTCAGGCTGTTCTGCTGGAGGTTTAGCAACCTTTCACCATTGTGACAACTTTGCCAAATACTTGCCAACAAATGCCAGTGTTAAATGTTTGAGCGATGCCGGTTTTTTTCTTGACGGAAGAGATGTGAGTTTGAACCACACTATGAGATACTTTGTCAAAAGTCTTGTTACGTTGCAGGGGGTAGAGAAGAACCTGAATAGAAACTGCACCAGTACACTGTTCTTTCCAGACTTGTGCTTCTTTCCACAATATGTGTTGAGATACATATCAACTCCTTATTTTATCTTGAATTCCGCCTATGATGTATTCCAATTCCATCATACATTGGTGCCACCTTCTGCTGATATGCATGGACACTGGAACAAGTGCAAGTTGGACCCAGCAGCATGCACACCACTCCAAATCGCCATATTGCAAGCTTTTAGGCTCGACATGCTTGCAACTTTGAGACCTTTTGCAATCTATTCGGGAAGAGGAGGAATGTTCATAAACTCATGTTTTGCTCACTGCCAAAGTGAATCACAAGATACGTGGTTTGAAGATGATTCCCCAAGAATAAACGACAAGACGATTGCAGAAGCAGTTGGTGATTGGTATTTTAGCAGAACAAGAAGCAAGGAAATAGACTGTCCATACCCATGTGACACAACTTGTCACAATCTTATACCATATCCTCGCCAATAG 1221 0.4406 MNIFFFVALVLLCVVTVAAPWRVVSEDNEEQHRLLVNMTLVKNARAGGALCLDGSLPAYHLHRGFGAGLNNWLLQFEGGGWCNDLPSCLERAESRRGSTRYMTKFEVFSGILSSNASQNPDFYNWNRVKLRYCDGASFTGDAIFDNGTTRLHFKGQKIWEAIIHDLLPKGLGKARKALLSGCSAGGLATFHHCDNFAKYLPTNASVKCLSDAGFFLDGRDVSLNHTMRYFVKSLVTLQGVEKNLNRNCTSTLFFPDLCFFPQYVLRYISTPYFILNSAYDVFQFHHTLVPPSADMHGHWNKCKLDPAACTPLQIAILQAFRLDMLATLRPFAIYSGRGGMFINSCFAHCQSESQDTWFEDDSPRINDKTIAEAVGDWYFSRTRSKEIDCPYPCDTTCHNLIPYPRQ* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3565 406 Pfam Pectinacetylesterase 30 382 IPR004963 GO:0016787
Ahy19g3565 406 PANTHER NOTUM-RELATED 29 402 IPR004963 GO:0016787
Ahy19g3565 406 PANTHER PECTIN ACETYLESTERASE 9 29 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3565 Ahy-Chr19 158308930 158316555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3565 7 402 Carbohydrate Esterase AT5G23870 67.588 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3565 K19882 - gmx:100802358 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3565 19 158308930 158316555 Ahy9g2062 9 109178743 109186050 hybridization