Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3562 ATGGATACACCAATTTTTGAAGAAGCATTGTCCGGCAGTGCGTATGACGTGAGGGAGAATTCTATTTTCACCGACGTTAATGTTCCGTGTTTGAGTGAAGATGACACACCACATGTAGATCAGGTTAATGTGTCTTTTGGTAAATTTTCATGTGATACATTGAGCCATATATTTAAGATGAGAATGAGTGTTAATGTATCTTTTGGTGAATTTTCTTGTGATACATCAAGCCACATAGTTAAGTTGAGAATGAGTGGGAAAGAATCTGAAGACGCTATTCAGAAAAAGGATGATGCTACGGTCCCGGATCACACTGGAATTCCAATGGAGGAAATCCCGTACGTAGGATTGAGATTTAATTCGTTACAGCGGGCACAAGAGTTCTATTCTAATTATGCGAAGAAAGTTGGGTTTGTGACGAGGATTAGGAATACAAACTTTGACAAGACCAGGAAAGAAATAAAGGTACCTATTAATCAATCGATACACTGTAGTCGTGAAGGTTATCGGGAATCTCGAGTGAAGGCAGCAATGCGGGTAAAGAGAATAACAACAGCTGGGTGCAAAGCAAGGATGTATGTGATGCTTGATAGGCATAATGATAATTGGCTGGTGACCAAATTAGAATTGAAGCACACCCACGCGTGTTCTGCCGAGCAAGCTGTGCATTATAGTGAGTACAGGGAACTGACCATGCATGCCATGTGTGTGATTCAGAACAACGATGAGGCTGGCATACGGCCTAACAAGACTTATCTCGCACTGGCAAATGAGGTTGGTGGGTCATCAAAGTTGGGTTACTCAGAAAAGGATGTTAGGAACTATATAACGAGGAATTTGCGCTGTGCTGATGTAAACGAAGATGTGAAGGAAATGATTAGATATTTCATGCGAATGAGAGATATAAACCCGAATTTCTTCTATGCAGTTGATGTGGACGAAACTAACAAGTTTAAGAGTGCGATATGGGTAGATGCAAGATGCAGGGCATCGTATGAATATTTTGGAGATGTGGTATCGTTTGATACAACGTACAGAAGGAACAAGCATGGACTTCCGTTTGCATCTTTCGTTGGTGTCAATCATCACGGCAAGTCCACACTACTCGGATGTGCTTTGTTGGGTAATGAGGAAATTCCTAGCTTTGAATGGGTCTTTAAAAACTGGTTAAATTGCATGGGAAATCCCCCACAGGCCATCATCACGGACCAGTGCAAATCCATATTTGGCGCAATTAAGAATGTCTTCCCAAATACTAGACACCGATGGTGTATATGGCACATAATGAAGAAGATACCACATAAGCTCGGAGGATATGCTAAATACAGGAAAATAGATGATAAAATGCATGGCACTGTTTGGAATACCCGTTCTGAAGCGTCTTTTGAGAAAGATTGGTTCGGTTTTTACTTTACTCGATTTCAGCCACCGTTGTCATCGGATGATGGGTAA 1452 0.4132 MDTPIFEEALSGSAYDVRENSIFTDVNVPCLSEDDTPHVDQVNVSFGKFSCDTLSHIFKMRMSVNVSFGEFSCDTSSHIVKLRMSGKESEDAIQKKDDATVPDHTGIPMEEIPYVGLRFNSLQRAQEFYSNYAKKVGFVTRIRNTNFDKTRKEIKVPINQSIHCSREGYRESRVKAAMRVKRITTAGCKARMYVMLDRHNDNWLVTKLELKHTHACSAEQAVHYSEYRELTMHAMCVIQNNDEAGIRPNKTYLALANEVGGSSKLGYSEKDVRNYITRNLRCADVNEDVKEMIRYFMRMRDINPNFFYAVDVDETNKFKSAIWVDARCRASYEYFGDVVSFDTTYRRNKHGLPFASFVGVNHHGKSTLLGCALLGNEEIPSFEWVFKNWLNCMGNPPQAIITDQCKSIFGAIKNVFPNTRHRWCIWHIMKKIPHKLGGYAKYRKIDDKMHGTVWNTRSEASFEKDWFGFYFTRFQPPLSSDDG* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3562 483 Pfam MULE transposase domain 338 431 IPR018289 -
Ahy19g3562 483 Pfam FAR1 DNA-binding domain 127 216 IPR004330 -
Ahy19g3562 483 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 90 467 - -
Ahy19g3562 483 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 90 467 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3562 Ahy-Chr19 158257697 158261060 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy19g3562 MULE 1.30E-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3562 - - ahf:112785545 922.154