Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3537 ATGCATGCTGCCCCTCTGACACATAACTTCTTTTGCTTCTCTCTCTCACTCTCTCTCACACATGCTTCATGGCATTGCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCAATGGCATTTTCATTTGCATGCACAACCACCACAACAACTGCCTACACCATATTCTTCAAGAAACACCATACCATCATGAAAACATCTCTCTCTTCCTCTCTCTCTCAGCCATCCATGGCGAGATACTACAACCTCGGACTCTGCTACCTTCTCCTGTTCCACTTGTTCTGCGGTGCCATTGCTGAACAAAACAACCAAAACCCAGAAAAAATTTCACTACTTTCCTTCAAAAATAGCCTCCACAACCCACAACTCCTCCCTTCGTGGCACCCTGCAACTCCGCACTGCGACTGGGTCGGCGTCACTTGCCAACTCGGCCGAGTCAACTCGCTCTCCCTCCCTTCTCGCAATCTTAGGGGCACCCTCTCTTCCTCCCTTTTCTCTCTCGCCTCCCTCGCCACCCTCGACCTTGGCGACAACAACCTCTCCGGTGAACTTCCCGGGGAACTTGGCCGCTTGACTCAGCTGGAGACCCTCCGACTCGGCTCCAACTCGTTTGCCGGAAAATTACCTCCTCAGCTGGGACTCCTCACAGAGCTTCGCACCCTCGACTTCTCCGGCAATGCCCTAGCCGGAGAACTTCCGGAGACTATCGGAAACCTGACCCAACTCGAGTTCCTCGACCTCAGCAATAATCTATTCTCAGGTTCACTACCTTTGTCTCTGTTCACAGGACCCGTATCTCTGATTTCCCTTGACATCTCCAACAACTCTTTTTCCGGCGAGGTTCCGCCGGAGATCGGGAACTGGAGGAACATCACCGCACTCTATGTGGGGAACAACAGATTATCTGGGAGGTTACCCAAGCAAGTTGGTGAGCTTTCAAAGCTTGAGATTTTCTATTCACCTTCCTGTTCCATTGAAGGTCCATTACCCAAGGAAATGGCAAAGCTCAAGTCTTTAACAAAACTTGACCTTTCCTACAACCCTTTGAGGTGTTCGATTCCTGAGTTTATTGGGGAACTTGAGAACCTCAAGATTCTTGACCTTGTTTTTTCTCAGCTCAATGGCTCAGTGCCACCTCAGCTTGGAAGATGTAGAAGCCTGAGGTCTGTTATGCTTTCTTTCAACTCACTCTCTGGTTCCTTGCCTATGGAGCTCTCTGAGCTTCCAATTGTGACTTTTTCTGCTGAGAAGAATCAGCTTCATGGGCCATTGCCTTCCTGGCTTGGAAACTGGACCAGTGTTAACTCTCTGTTGCTCTCTGCTAATCATTTCTCCGGTGCGATTCCGCCGGAGCTCGGGAACTGCAGTATGATGGAGCATCTCAGTTTGAGCAGCAATTTGTTGAGTGGAGAAATACCTGAGGAGCTATGCAATGCTGCATCACTTTTGGAGATTGATCTTGATGACAATTTCCTATCTGGCTCCATTGAGAAAGTGTTTGTCAAGTGCAAGAACCTCACTCAGTTGGTCCTCATGAACAATCAGATTGTTGGTTCAATACCTGATTACTTTTCCGAGATTCCCTTGATGGTGCTGGACCTTGACTCCAACAATTTCACTGGCAACATTCCTTCCAGCCTCTGGAATTCGTCCACTCTGATGGAATTCTCAGCCGCGAATAACCGTTTGGAGGGTTCTCTTCCTGTTGAGATTGGCAATGCTGTTATACTAGAAAGGCTTGTTCTTAGCAATAATCAAATTTCCGGTACTATACCGAAGGAAATTGGAAGGCTCACTGGCCTTTCTGTTCTTAATCTAAATGGTAACATGCTTGAAGGGAGTATTCCAATTGAGCTCGGTGATTGCATTTCTCTTACCACATTGGATCTTGGAAACAATAGACTCAATGGCTCCATTCCTGAGAAACTGGTGCAGCTGAGTCAACTGCAGTGTTTGGTTCTTTCTCACAATGATCTGTCCGGGCCTATTCCCCATAAGAACTCTTCCTACTTTCGACAACTTACCATACCGGACTTGAGCTTTGTTCAGCACCTTGGTGTGTTTGATTTGTCCCATAATAGATTGTCTGGCACCATACCTGATGAGCTGGGGGGCTGTGTGGTGGTTGTGGATCTATTGATCAGTAACAACCTGCTATCTGGGAGTATTCCAAGATCACTCTCGCGCTTGACTAATCTTACAACTTTGGATTTGTCTGGCAACTTATTGTCCGGTTCCATTCCACCAGAGCTTGGAGATGCCCTTAAGCTGCAGGGTTTATATCTGGGATACAATCAACTCTCAGGTGCAATCCCTGCAAGTTTTGGGAAATTGAGTAGTTTGGTGAAGCTGAATTTGACAGCGAATAAGCTGTCTGGTCCAATTCAAATTAGTTTTCGAAACATGAAAGAGTTGACACACTTGGACTTGAGCTCCAATGAGCTCAGCGGCGAGCTTCCATCCTCACTGTCAGCAGTGCAAAGCCTTGTTGGGGTTTATGTCCAGAGGAATCAGCTTTCTGGCCAAGTAGGGGAGCTCTTCTCAAACTCAATGACTTGGAGGATTGAGATTATGAATTTGAGTGAGAACTGGTTCAATGGGAACTTGCCACGATCTTTGGGAAACCTTTCGTACATGACAAATTTGGATCTTCACAGAAATATGTTGACTGGAGAGATTCCTCCGGACCTCGGAAATCTGATGCAATTGGAGTACTTTGATGTTTCAAGTAATAAGCTATCAGGAAGGATTCCAGAGAAGCTATGCAGCCTAGCTAATCTGAATTTCCTAGATTTGTCTCAAAACAGATTGGAAGGGCCAATACCAAGAAGTGGCATTTGCCAAAACTTATCAAGAGCTAGATTTGTGGGGAACAAAGATCTTTGTGGGAAAATGCTTGGTATTAATTGTCAGATCAAAAGCATTTGCAGGTCGGCTTTTTGCGACGCATGGAGGGTAGCTGCAATTGCCATTACAGTCATACTGATAACTCTGAGCATTGGTTTTGTTCTATATAAATGGTTTAGCAGGAGGCAAAGTGATCCTGAGGAACTTGAGGAGCGCAAACTAAACAGCTATGTGGATCAAAATCTTTATTTCCTGAGCAGTAGCAGATCAAAAGAACCTCTGAGTATCAATGTGGCAATGTTTGAGCAACCTCTTCTGAAATTAACCTTGGCTGATATCCTCGATGCTACTGACAACTTCAGCAAGGCAAACATAATTGGAGATGGAGGTTTTGGAACTGTGTACAAGGCCACTTTGCCTAATGGAAACACAGTTGCTGTGAAGAAGCTCAGCGAAGCTAAAACGCAGGGTCATCGCGAGTTCATTGCCGAGATGGAAACCTTGGGCAAGGTGAAGCATCAAAACCTTGTTGCATTGCTGGGATATTGCTCAATGGAGGAGGAGAAAGTCCTTGTTTACGAGTACATGGTAAATGGGAGCTTAGATTTGTGGCTAAGAAACAGGACCGGAGCCCTTGAAATCCTGGATTGGAAGAAACGTTACAAGATTGCAGCCGGCGCAGCTCGAGGGCTAGCTTTCCTTCATCATGGTTTCATACCCCACATCATCCACAGGGATGTTAAAGCAAGCAACATTCTTCTGAATGAGGAATTTGAGCCAAAAGTGGCAGACTTTGGACTTGCAAGATTGATCAGTGCTTGTGAGACTCACATCACCACTGACATAGCCGGAACATTTGGTTACATCCCTCCTGAGTATGGACAGAGTGGGAGATCCACAACAAGAGGAGACGTGTACAGTTTTGGTGTGATTTTGCTCGAATTGGTGACCGGAAAAGAGCCAACTGGACCTGATTTCAAAGAGATTGAAGGTGGGAATTTGGTTGGATGGGTTAGTCAGAAGATCAAGAAGGGTGAGGCTTCTGATGTTCTTGATCCAACAGTTCTTGATGCTGATTCAAAGGCAACGATGCTTCAGATGCTGCAGATTGCTTGTGTATGCCTCTCAGATAACCCTGTGAACCGGCCTACAATGCTTCAAGTGCACAAGTTCCTCAAGGGATTAGGGGATAGTAATTGA 4053 0.4609 MHAAPLTHNFFCFSLSLSLTHASWHCLLLLLLLLLLLLPPMAFSFACTTTTTTAYTIFFKKHHTIMKTSLSSSLSQPSMARYYNLGLCYLLLFHLFCGAIAEQNNQNPEKISLLSFKNSLHNPQLLPSWHPATPHCDWVGVTCQLGRVNSLSLPSRNLRGTLSSSLFSLASLATLDLGDNNLSGELPGELGRLTQLETLRLGSNSFAGKLPPQLGLLTELRTLDFSGNALAGELPETIGNLTQLEFLDLSNNLFSGSLPLSLFTGPVSLISLDISNNSFSGEVPPEIGNWRNITALYVGNNRLSGRLPKQVGELSKLEIFYSPSCSIEGPLPKEMAKLKSLTKLDLSYNPLRCSIPEFIGELENLKILDLVFSQLNGSVPPQLGRCRSLRSVMLSFNSLSGSLPMELSELPIVTFSAEKNQLHGPLPSWLGNWTSVNSLLLSANHFSGAIPPELGNCSMMEHLSLSSNLLSGEIPEELCNAASLLEIDLDDNFLSGSIEKVFVKCKNLTQLVLMNNQIVGSIPDYFSEIPLMVLDLDSNNFTGNIPSSLWNSSTLMEFSAANNRLEGSLPVEIGNAVILERLVLSNNQISGTIPKEIGRLTGLSVLNLNGNMLEGSIPIELGDCISLTTLDLGNNRLNGSIPEKLVQLSQLQCLVLSHNDLSGPIPHKNSSYFRQLTIPDLSFVQHLGVFDLSHNRLSGTIPDELGGCVVVVDLLISNNLLSGSIPRSLSRLTNLTTLDLSGNLLSGSIPPELGDALKLQGLYLGYNQLSGAIPASFGKLSSLVKLNLTANKLSGPIQISFRNMKELTHLDLSSNELSGELPSSLSAVQSLVGVYVQRNQLSGQVGELFSNSMTWRIEIMNLSENWFNGNLPRSLGNLSYMTNLDLHRNMLTGEIPPDLGNLMQLEYFDVSSNKLSGRIPEKLCSLANLNFLDLSQNRLEGPIPRSGICQNLSRARFVGNKDLCGKMLGINCQIKSICRSAFCDAWRVAAIAITVILITLSIGFVLYKWFSRRQSDPEELEERKLNSYVDQNLYFLSSSRSKEPLSINVAMFEQPLLKLTLADILDATDNFSKANIIGDGGFGTVYKATLPNGNTVAVKKLSEAKTQGHREFIAEMETLGKVKHQNLVALLGYCSMEEEKVLVYEYMVNGSLDLWLRNRTGALEILDWKKRYKIAAGAARGLAFLHHGFIPHIIHRDVKASNILLNEEFEPKVADFGLARLISACETHITTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVSQKIKKGEASDVLDPTVLDADSKATMLQMLQIACVCLSDNPVNRPTMLQVHKFLKGLGDSN* 1351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3537 1350 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 91 201 - -
Ahy19g3537 1350 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 180 431 - -
Ahy19g3537 1350 Gene3D Ribonuclease Inhibitor 415 673 IPR032675 -
Ahy19g3537 1350 Gene3D Transferase(Phosphotransferase) domain 1 1147 1347 - -
Ahy19g3537 1350 ProSiteProfiles Leucine-rich repeat profile. 340 362 IPR001611 GO:0005515
Ahy19g3537 1350 Pfam Leucine rich repeat N-terminal domain 107 143 IPR013210 -
Ahy19g3537 1350 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 858 1346 - -
Ahy19g3537 1350 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 416 848 - -
Ahy19g3537 1350 ProSiteProfiles Protein kinase domain profile. 1071 1343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3537 1350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1193 1205 IPR008271 GO:0004672|GO:0006468
Ahy19g3537 1350 Pfam Leucine Rich Repeat 807 826 IPR001611 GO:0005515
Ahy19g3537 1350 Pfam Protein tyrosine and serine/threonine kinase 1074 1343 IPR001245 GO:0004672|GO:0006468
Ahy19g3537 1350 Gene3D Phosphorylase Kinase; domain 1 1033 1146 - -
Ahy19g3537 1350 SMART serkin_6 1071 1343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3537 1350 SUPERFAMILY Protein kinase-like (PK-like) 1052 1343 IPR011009 -
Ahy19g3537 1350 SUPERFAMILY L domain-like 258 524 - -
Ahy19g3537 1350 SUPERFAMILY L domain-like 109 319 - -
Ahy19g3537 1350 SUPERFAMILY L domain-like 458 677 - -
Ahy19g3537 1350 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 91 201 - -
Ahy19g3537 1350 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 858 1346 - -
Ahy19g3537 1350 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 180 431 - -
Ahy19g3537 1350 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 416 848 - -
Ahy19g3537 1350 SMART LRR_sd22_2 217 243 - -
Ahy19g3537 1350 SMART LRR_sd22_2 732 747 - -
Ahy19g3537 1350 SMART LRR_sd22_2 338 364 - -
Ahy19g3537 1350 SMART LRR_sd22_2 902 928 - -
Ahy19g3537 1350 SMART LRR_sd22_2 804 827 - -
Ahy19g3537 1350 Gene3D Ribonuclease Inhibitor 674 975 IPR032675 -
Ahy19g3537 1350 Gene3D Ribonuclease Inhibitor 264 414 IPR032675 -
Ahy19g3537 1350 Gene3D Ribonuclease Inhibitor 106 263 IPR032675 -
Ahy19g3537 1350 ProSitePatterns Protein kinases ATP-binding region signature. 1077 1100 IPR017441 GO:0005524
Ahy19g3537 1350 SUPERFAMILY L domain-like 674 965 - -
Ahy19g3537 1350 PRINTS Leucine-rich repeat signature 926 939 - -
Ahy19g3537 1350 PRINTS Leucine-rich repeat signature 807 820 - -
Ahy19g3537 1350 SMART LRR_typ_2 926 951 IPR003591 -
Ahy19g3537 1350 SMART LRR_typ_2 338 360 IPR003591 -
Ahy19g3537 1350 SMART LRR_typ_2 362 386 IPR003591 -
Ahy19g3537 1350 SMART LRR_typ_2 241 265 IPR003591 -
Ahy19g3537 1350 SMART LRR_typ_2 732 756 IPR003591 -
Ahy19g3537 1350 SMART LRR_typ_2 878 902 IPR003591 -
Ahy19g3537 1350 SMART LRR_typ_2 169 193 IPR003591 -
Ahy19g3537 1350 SMART LRR_typ_2 804 828 IPR003591 -
Ahy19g3537 1350 SMART LRR_typ_2 600 624 IPR003591 -
Ahy19g3537 1350 SMART LRR_typ_2 684 708 IPR003591 -
Ahy19g3537 1350 SMART LRR_typ_2 625 648 IPR003591 -
Ahy19g3537 1350 SMART LRR_typ_2 217 240 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3537 Ahy-Chr19 158140918 158145253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3537 109 1344 Receptor kinase-like Gene Family AT5G07280 59.823 0.0 1431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Ahy19g3537 PK_Tyr_Ser-Thr 1.50E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3537 - - aip:107618864 2590.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3537 19 158140918 158145253 Ahy9g2088 9 109542382 109546672 hybridization