Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3532 ATGGGCTTCTTCCGCCGACTTTTTGGCGCCAAAAAGAAACCCACCACACAAACCCCTGCCTCCAAACCGCCCAAGAGAAGATGGAGCTTCGCCAAACACCCTCCACAACCACAACCCCCCTCCTCCGCCCTCAACCACCACTATGACCCCTCCTCCTCCTCCTTAGACGCCAACAAGCATGCCATCGCCGTTGCAGCCGCCACTGCAGCCGTTGCAGAGGCCGCTCTCGCAGCCGCCCACGCCGCCGCCGAGGTTGTTCGCCTCACCAGCGCCGGAGCTCTCCCAACTACTCCTACCACTACCAGCAGGCCGAACGTTTCCTCCGCCGCCGTTAAGATACAATCGGCGTTTCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCGCTAAAAGCATTGGTGAAGTTGCAAGCATTGGTTAGGGGCCACATCGTGAGAAAGCAAACCGCAGATATGCTAAGGCGCATGCAAACATTGGTGCGACTCCAGGCCCAGGCACGTGCCACTCGCGTGTTCTCACATACTAATACCACTATGCACTCTTTCAAGCCTTCACTTTCCCATTATTACCCTGTCCCTGAAGAATATAGTACTAAATTTGATGGATCTTCTATTTTGAAGAGATGTAGTTCCAATGCGAACTTCAGGGAGAGGGGGGCACGGTTTGGTTCGAGTTGGTTAGAGCGATGGATGAAAGAAAGAGAAAACAGAGATGAGGATGAGGAGAAGATGAGTGACAAGATTCTGGAAGTAGACACATGGAAACCGCCACTAAGGTCAATGAAAGGAAAAGAAGAAGTATGTTCAAGAACCGCCGATAACAGCCCGCAAACATTATTGTCTTCGTCATCATCTAGGAGGCAGGGTGGACCCTTTACGCCCACAAGGAGCGAGTGCTCCTTCCATGGCTATGCAGGGCACCCCAACTACATGTCCAACACGCACTCTTCTAGAGCTAAGGTTAGATCGCAGAGTGCACCAAGACAGAGACTTGATTATGATAGATACGGATACGCTTGTTCCAATAATACTCTTCTTCATTATCATTCACATTTGAGGAGTAAAGTGTCAAGTAGTCGTTTCAATAGAATTGGGGTTACCAATTTAAGGTGA 1110 0.5072 MGFFRRLFGAKKKPTTQTPASKPPKRRWSFAKHPPQPQPPSSALNHHYDPSSSSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSAGALPTTPTTTSRPNVSSAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQAQARATRVFSHTNTTMHSFKPSLSHYYPVPEEYSTKFDGSSILKRCSSNANFRERGARFGSSWLERWMKERENRDEDEEKMSDKILEVDTWKPPLRSMKGKEEVCSRTADNSPQTLLSSSSSRRQGGPFTPTRSECSFHGYAGHPNYMSNTHSSRAKVRSQSAPRQRLDYDRYGYACSNNTLLHYHSHLRSKVSSSRFNRIGVTNLR* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3532 369 PANTHER IQ-DOMAIN 5-RELATED 259 337 - -
Ahy19g3532 369 Pfam Protein of unknown function (DUF4005) 269 333 IPR025064 -
Ahy19g3532 369 MobiDBLite consensus disorder prediction 1 52 - -
Ahy19g3532 369 Gene3D - 105 157 - -
Ahy19g3532 369 Pfam IQ calmodulin-binding motif 130 147 IPR000048 GO:0005515
Ahy19g3532 369 Pfam IQ calmodulin-binding motif 108 127 IPR000048 GO:0005515
Ahy19g3532 369 ProSiteProfiles IQ motif profile. 107 134 IPR000048 GO:0005515
Ahy19g3532 369 PANTHER CALMODULIN-BINDING PROTEIN 259 337 - -
Ahy19g3532 369 MobiDBLite consensus disorder prediction 269 294 - -
Ahy19g3532 369 PANTHER IQ-DOMAIN 5-RELATED 1 265 - -
Ahy19g3532 369 PANTHER CALMODULIN-BINDING PROTEIN 1 265 - -
Ahy19g3532 369 SMART iq_5 105 127 IPR000048 GO:0005515
Ahy19g3532 369 SMART iq_5 128 149 IPR000048 GO:0005515
Ahy19g3532 369 MobiDBLite consensus disorder prediction 262 297 - -
Ahy19g3532 369 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 151 IPR027417 -
Ahy19g3532 369 ProSiteProfiles IQ motif profile. 130 157 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3532 Ahy-Chr19 158090589 158093610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3532 1 349 IQD Protein Family AT5G62070 49.476 9.64e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3532 - - ahf:112711676 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3532 19 158090589 158093610 Ahy19g3532 19 158090589 158093610 ECH
Ahy19g3532 19 158090589 158093610 Ahy9g2093 9 109598038 109600882 hybridization
Ahy15g3495 15 157691801 157696629 Ahy19g3532 19 158090589 158093610 PCT
Ahy19g3532 19 158090589 158093610 Ahy15g3495 15 157691801 157696629 PCT