Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3524 ATGGAAGCGAATCATGGCGGTTTCAGCGAAGAACCGAACGACACTCAAAGCGCCGACGTATCACCCTCTGAGACAACGCCAATAGCGAAAGCGCCGGAACCTAGGTTCCCGGAGCCGGTACCTCCGTCTCCGGTGGCGGTGCCTATGAAGGAGGAGCTCGCGGACTCCGAGAAGAGCCTTGAGGAGCGTCTCCAGGTGGCGATTGTTCCCACGCCGGTGGCAAGGAGGCCGTCGAAGGACCGCCACACGAAGGTAGAGGGGCGCGGCCGGAGAATCCGGATGCCGGCGACGTGCGCCGCCAGGATCTTCCAGCTGACACGGGAGTTAGGCCACAAGTCCGACGGGGAAACAATACGGTGGCTGCTGGAACAGGCTGAGCCGGCCATCATCGAGGCCACCGGTACAGGAACGATCCCGGCGATCGCGGTTTCGGTGGGCGGCACACTCAAGATCCCAACGACGTCGACGGCGACGCCACAAGGCGAAGAAGAGGCGTCGAGAAAACGAAGAAGAAGGGCATCGAACAGCGAGTTCATTGATGTGAATGAAGAACAATCCTCAGTGTCTTCGGGTCTCGCACCAATCACACAAACCGCATACGGCGGTAGTTCTAGTGGTGGTGGACTCGTTCCAATGTGGACTATTGGTGGCGGTGGTGGTGGTTCTAATGGTCCTTTTTTCATGTTCCCAAATGCTGCTGCTACTTCTTCCGGGGATGGTGTTGCGAACCATCCTCATTATTGGGCTTTTCCAGCGAATGCGGCGCCGTATTTCAACGTTCAAGCTCGGCCTATTTCGGGGTTTGTTGCGGCTGAGCAATTAGGCCATGTGGTAGTGCAGCAGCAGCAGCCGCAGCCGCCGCCGCCGCCGCCGCCGCCGCCTAGTTGTTGTTCTTCTAATGGCTCTGCTAACTCTTGTTCTACTCTGGCTCCTAGTTTGAGCTCTGGAACCAGTGCTACTAATAATGGCTCTACTTCTACTTCTAGTGCTGCCACTCAGATGCTTAGGGATTTCTCTTTGGAGATTTACGACAAGAAAGAGTTGCAATTCTTGGCTTGCTCTTCCTCTTCTTCTGCCGTTGCTGAAGCTAAGTTGGAACAACCACCACCTCACACTCACAGTTCTAAGCCTTCAAACTGA 1140 0.5605 MEANHGGFSEEPNDTQSADVSPSETTPIAKAPEPRFPEPVPPSPVAVPMKEELADSEKSLEERLQVAIVPTPVARRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEQAEPAIIEATGTGTIPAIAVSVGGTLKIPTTSTATPQGEEEASRKRRRRASNSEFIDVNEEQSSVSSGLAPITQTAYGGSSSGGGLVPMWTIGGGGGGSNGPFFMFPNAAATSSGDGVANHPHYWAFPANAAPYFNVQARPISGFVAAEQLGHVVVQQQQPQPPPPPPPPPSCCSSNGSANSCSTLAPSLSSGTSATNNGSTSTSSAATQMLRDFSLEIYDKKELQFLACSSSSSAVAEAKLEQPPPHTHSSKPSN* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3524 379 MobiDBLite consensus disorder prediction 150 187 - -
Ahy19g3524 379 MobiDBLite consensus disorder prediction 280 330 - -
Ahy19g3524 379 MobiDBLite consensus disorder prediction 9 24 - -
Ahy19g3524 379 PANTHER TRANSCRIPTION FACTOR TCP9 18 356 - -
Ahy19g3524 379 MobiDBLite consensus disorder prediction 32 46 - -
Ahy19g3524 379 MobiDBLite consensus disorder prediction 162 178 - -
Ahy19g3524 379 MobiDBLite consensus disorder prediction 359 379 - -
Ahy19g3524 379 ProSiteProfiles TCP domain profile. 78 132 IPR017887 -
Ahy19g3524 379 MobiDBLite consensus disorder prediction 1 59 - -
Ahy19g3524 379 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 356 IPR005333 GO:0003700
Ahy19g3524 379 MobiDBLite consensus disorder prediction 282 297 - -
Ahy19g3524 379 Pfam TCP family transcription factor 78 163 IPR017887 -
Ahy19g3524 379 MobiDBLite consensus disorder prediction 298 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3524 Ahy-Chr19 157995001 157996752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3524 72 351 TCP Transcription Factor Family AT5G51910 48.621 6.46e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy19g3524 TCP 7.80E-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3524 - - aip:107617519 628.632