Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3516 ATGGGGAAGGACTATTGGTGGTATTGGCCTGCTCCTGCATTTGGAAGGTCCTCTTCCTCCTCCTCCTCCTCCTCCAAGCCTTCTACTTCTACTGGTTGCATGTGTTCTCTCTTTCAAACCTTCCATTTCCATCCATTTCACTTTTCCATAAACCAACATCAACACAAGTCTCCCTCTTCCATCTCACAATGTCTCTCCAAAGATGGTGCTGAAGGACCAAGGAATAGCTTGGAATCACAACATGGTACTGCCTCCTCAAAAGAACAACAACATTTACAAATTCCGAAGAACATTCGAATCAAAACAAGCAGAAGCATGACAAGAACAAGATCAGGAAATTATTCGAGTGATTTCTCCTCGGAAATGAGCTTCTCTCCGGGAACCAAGACACCAACATTGGTTGCAAGATTGATGGGGCTTGATCTTCTTCCTGAAAACAACTCTTCCTCTCCTAATTCCTCCTCTTCTTCAACCCTCTCCACTCCAATAATTAGTAACAAACATGGAAGAAGCAACAACAATAACAATAATCCACAGGTTCATCATCATAACCCTAAAGCAAGGCACCAGCATCACCACATCCAAATAATGAGACACAGACACAGCACAGACAGCATAGGAACCATTCGTTCCTTGTCTGATACTCCAAGAAGATCAGATGTTGAGCATAGTAGACTCTCTTTGCAAATCAACAAGGAGAACATTGGGGTTGATGAGAACTACTTGGAAGCCCCTCGCTTCTCATTTTCAAAGAGGAAATTTGATGAGAACAACAACAATAGTAGTAGCAGCAGAAGTCCAAGCCACTATGCAAGGCAAATTGTGAAGCAGGTTAAGGAAAGTGTAAGCAGGAGAGTTGGGATAACTGACATAACCAACACTGTTAAGAACAGAGAGCAAGAATCTTCTGTGGTCCAACAAATCAGATTCAAGAAAGCTACAAAGACAAGTAGTAATGTGAATGTGAATGTGAATGTGATTGTGAATGAAGCTTGCAGCCCGGGGAAGCAGTCACCAAGACTCAGCAGATTCGTTGACTCCAAACACAATAACCCAAACAGCATCACAAAACCATCATCACCTCTTACCCCAAAAGATCAAAAGCCGTTATCATCGTCACCTACTACTACTCCACTTCCTATTGCTCACCAGACTGAAACACAATTAAGCTCAAAAGATGATTTGCAGAGCAAAAAGTCATCATCAGCTCCAAAATGCAAGAGAAGCAGGACTACTGAGAAGTTGGGATCAGGGGTGAATAGGACTACTGCTCCACAGACATCATCAATAAGAAAGAAGCAACAAGAGTCATTTGTTTCCTGTACACTCTCACCAACAAGACCCAAAACCAAGAACAGATCAACTCATCCACTTTCAAGCAACCTTCTTCTCAATACAGCTCCAAATCTTCTCCCTGTCAAGACTCACCCTTCTCCTCTCCCAACTAAAATCCCCCAAAAACAGCCATGTGATACTCAAGAACAAAGACGCAGCAGCGCACAGTTATCAAGTTGTGCCCGCCAGAAGTACAAAAAAGATGCAATTCAAACACCCGCCGGCGCCACCACCACCGCAGCCGACGATCAAGGACCAGAATTTGAGTACATCACAAGCATACTAAGCCGCACGGGGTTGCGCAAAGCTACGTTACCCCAAATCCAATACCAATGGTTCTCTCTTTCCCACCCATTAGACCCTTCACTCTTTCACAACCTCGAGCATCACTACCCATCATCCAATCCAGACAAAGGTTGCATCTTTACGCAGAGGGACCAACTGGGTCTTCGCTGTAACCGGAGACTACTATTCGACTTGGTCGATGAACTGCTGTCGGAGATTCTGGCAAGACGAAAACACGAGGGTGGGTTGTTGGTGGAGACAGTGTGGAGGAAGGTTCGGAGTTTCCCAGGTGCGAAGTGTGAGGTTCTGGAGGATATTGATGGGTTGATAGAAATGGAGGAGATGGAGAGGAAGGTGAAGGAGGAAAGAGAAGAAGGGTTGGTGATGGAGATTGGAAGGAGCATAATGGAGACGTTGGTGCATGAAACTGTTACCGTCTTCATGCTTTGA 2070 0.4478 MGKDYWWYWPAPAFGRSSSSSSSSSKPSTSTGCMCSLFQTFHFHPFHFSINQHQHKSPSSISQCLSKDGAEGPRNSLESQHGTASSKEQQHLQIPKNIRIKTSRSMTRTRSGNYSSDFSSEMSFSPGTKTPTLVARLMGLDLLPENNSSSPNSSSSSTLSTPIISNKHGRSNNNNNNPQVHHHNPKARHQHHHIQIMRHRHSTDSIGTIRSLSDTPRRSDVEHSRLSLQINKENIGVDENYLEAPRFSFSKRKFDENNNNSSSSRSPSHYARQIVKQVKESVSRRVGITDITNTVKNREQESSVVQQIRFKKATKTSSNVNVNVNVIVNEACSPGKQSPRLSRFVDSKHNNPNSITKPSSPLTPKDQKPLSSSPTTTPLPIAHQTETQLSSKDDLQSKKSSSAPKCKRSRTTEKLGSGVNRTTAPQTSSIRKKQQESFVSCTLSPTRPKTKNRSTHPLSSNLLLNTAPNLLPVKTHPSPLPTKIPQKQPCDTQEQRRSSAQLSSCARQKYKKDAIQTPAGATTTAADDQGPEFEYITSILSRTGLRKATLPQIQYQWFSLSHPLDPSLFHNLEHHYPSSNPDKGCIFTQRDQLGLRCNRRLLFDLVDELLSEILARRKHEGGLLVETVWRKVRSFPGAKCEVLEDIDGLIEMEEMERKVKEEREEGLVMEIGRSIMETLVHETVTVFML* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3516 689 MobiDBLite consensus disorder prediction 398 414 - -
Ahy19g3516 689 Pfam Domain of unknown function (DUF4378) 532 682 IPR025486 -
Ahy19g3516 689 MobiDBLite consensus disorder prediction 332 504 - -
Ahy19g3516 689 MobiDBLite consensus disorder prediction 58 130 - -
Ahy19g3516 689 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 373 - -
Ahy19g3516 689 MobiDBLite consensus disorder prediction 143 181 - -
Ahy19g3516 689 MobiDBLite consensus disorder prediction 182 198 - -
Ahy19g3516 689 MobiDBLite consensus disorder prediction 485 504 - -
Ahy19g3516 689 MobiDBLite consensus disorder prediction 415 472 - -
Ahy19g3516 689 MobiDBLite consensus disorder prediction 76 130 - -
Ahy19g3516 689 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 384 687 - -
Ahy19g3516 689 MobiDBLite consensus disorder prediction 252 271 - -
Ahy19g3516 689 MobiDBLite consensus disorder prediction 143 224 - -
Ahy19g3516 689 Pfam DUF761-associated sequence motif 119 149 IPR032795 -
Ahy19g3516 689 PANTHER DUF4378 DOMAIN PROTEIN 384 687 - -
Ahy19g3516 689 PANTHER DUF4378 DOMAIN PROTEIN 1 373 - -
Ahy19g3516 689 MobiDBLite consensus disorder prediction 344 397 - -
Ahy19g3516 689 MobiDBLite consensus disorder prediction 254 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3516 Ahy-Chr19 157869343 157872331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3516 107 688 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 32.969 5.22e-50 182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3516 19 157869343 157872331 Ahy19g3516 19 157869343 157872331 ECH
Ahy19g3516 19 157869343 157872331 Ahy9g2112 9 109886472 109889305 hybridization
Ahy15g3439 15 156955395 156958701 Ahy19g3516 19 157869343 157872331 PCT
Ahy5g3035 5 111891182 111894456 Ahy19g3516 19 157869343 157872331 PCT
Ahy19g3516 19 157869343 157872331 Ahy15g3439 15 156955395 156958701 PCT
Ahy19g3516 19 157869343 157872331 Ahy5g3035 5 111891182 111894456 PCT