Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3488 ATGGAGCAACACTGTTGTTACTGCTTCGACTGCCTCCAGCTTCGAATCAACTCCGATTTCTCCGACCAACTCTTGTTCAATTATGGCATTTCCTCTTCCCCTTTCCCTTTCGGTTCTTCCGCCGTCGTCCAAATTTCTGGTACAGCTGGCAGTGAAGCTTCATCCGGTCAATTTATATTGCAGTACACGCGCTCTCATCACAGCAATTGTTTCTCCAATTATGTAAATGAGTATATTTTGGATAGTAATGAAGGAACTAGGAGTAGTGATCCTGATACTGGCACAAGCCAATGTGGTCCTAATGTGCAAAATGGTGGAATTTCTTCATCATCAGATGCTGAAACCAAAAGAGCATCTTCCATGAGCACAAGTTGTAGTCATTCCGGAAAGTTTTCTTGCTTCAGGATAATCACTTCACTGGCCCCCGGTGCCCGCGTGGAAGTTTCTTCATTTTCTACCATCCAAGAGGTTGCCACTGATTTCTTGTCTGGGTTAATGGAAGATCATGTGTTGGATTCACTTGATATCTGGATTGAAGGGAAAGCTTCAGGAAGGGACAGCACAAATTTCCTTAGCTTAATTGGCTTGCCATTTTTTCAGGAGGACACATTTCCCGGCTCCTTGAGGCATCCAAACATAGCCCCTGTCCTTGCATTTTTTAAATCATCTGATCATGTTAACATGGTGCTTCCAAAGACTCCATACAATCTCGAGAATATTCTGCATTTTAACCCCAGTGCCTTTAAATCTGACTGGCATAGAGGATTTCTTATATATCAGCTGCTCTCAGCTTTGGTATACCTTCATGGTCTAGGGGTTTCTCATGGCAACTTATGCCCATCCAATATCATGTTGACTGACTCATTATGGTCTTGGCTGAGATTATGGAATGAACCTACATTGGAATTTAATTCAACTTTACAAAAGAGTGAAGACGTTAATTCAAGCCCTGCAAAAATTAGTTGTTACAATAGTGGTTGCCATTCTAATGGTCTTTATGCTGATTTAAAGCTTTCACCGTCAATAGATTGGCATTCTAGCTTCCATCATTGGTGGAAAGGAGAGTTGAGTAATTTTGAGTATTTACTTATCTTAAACAGATTAGCAGGCAGAAGGTGGGGAGACCATACATTTCATCCAGTAATGCCTTGGGTAATTGATTTTAGCACCAAACCTGATGATAATTGTGATGCAGGATGGCGAGACTTGAGCAAGAGCAAATGGCGCTTAGCAAAAGGTGATGAACAGTTGGATTTCACCTATTCAACATCTGAAATACCTCATCATGTGTCAGATGAATGCCTCTCTGAACTGGCTGTGTGCAGTTATAAAGCAAGAAGGCTGCCTTTGAGGGTACTCCGAATGGCTGTTCGTTCAGTTTATGAACCTAACGAATATCCTTCCACAATGCAGAGGCTCTATCAATGGACCCCAGATGAGTGCATTCCAGAGTTCTACTGTGACGCCCAAATATTTAGGTCGATTCATGATGGAATGGCTGATTTGGCTGTACCTTCTTGGGCTGAGACTCCAGAGGATTTCATTAAATTGCATCGTTGGGCATTAGAAAGTAATATGGTTTCTTTTCAACTCCATCAATGGATAGATATAACCTTTGGGTACAAAATGTCTGGGCAAGCAGCTATTGCTGCAAAGAATGTTATGCTTCCTATATCAGAACCTACGATGCCAAGGTCAACGGGACGTCGTCAGCTCTTTACACGACCTCACCCCATTCGTCTTGCCACTCCAACTGCACGTCGTTATGCCACCAATAAATATGCTAAAGTTTGGAGCCAGGAAAATGAAATACTGCGAGAGACGACTCTCCTGTCTGATGCTGCCTATCTACAAGAACTAGAACAAGCATCTGCATTTTCTGAGCATGCTAGGCATTTGAATTCTTGTTATCAGTGTCCATTAAATCAAACACAGGGAGATCCAACAAAGCAGTCAATTAACGAAAGCATATGCAAATTATCTTTGCCTGACAGAAATTACATGCTGCCATATAAAATGAATCTGATTTCTTTGATTCAGCATATGAAGGAAGAAGATGACGGTTCGCCAGGATATCCAGACTATTTGCTTTGGAGGCAAAAATTGTCTTCCTCAAAAGTTAGCTCTGAAGATATTGCTAGGGACATTTTTTCTATTGGTTGTCTGTTAGCAGAACTTCATCTTTCTAGTCCCCTCTTTGATTCAACCTCATATGCGATGTACTTGGAAGATGGGACCTTACCAGGATCTCTTTGTGAACTACCTCCTTATGTTAGGTTACTTGTTGAAGCATGCATACAAAAGGATTGGACGAGGAGGCCTTCAGCCAAATTTCTTCTGGAATCACCTTATTTTCCAAAGACAATAAAGTCCTCCTACACGTTTCTTGCCCCACTTCAGCTTGTTGCTAAGGATGAGACCCGCCTTCGTTATGCCACAAATCTTGCAAAGAAGGGAGCTCTCAGAGAAATGGGCTCATTAGCAGCTGAAATGTGCGCTACTTATTGCTTACCACTTGTAGTCAATACTGTGAATGATGCTGAAGCTGAATGGGCATATATACTACTGAAAGAATTTATGAAATGCTTAAAAGAAAAAGCAGTGAAGAAATTAATCTTGCCAACCATACAGAAGATTTTGCAGACAACAGGTCATCTACATTTAAAGGTTTCCCTTTTACAAGATTCATTTGTACGTGAAATATGGAACCGAGTTGGTAAACAAGTATACCTGGAAACTATTCACCCATTGGTTTTATCAAACTTGTATAATTCTCTGGATAAAAGTTCAGCTGCATCTGCCTCTGTCCTTCTAGTTGGTTCTAGTGAGGAGCTTGGAGTACCTATTACCATCCACCAGACAATCTTGCCTCTTGTTTACTGTTTTGGTAAAGGACTTTGTGCTGATGGCATTGATGTGCTGGTCAGACTTGGTGGCCTTTTTGGAGAATCCTTTATTGTAAAACAGATGCTACCATTACTAAAAAATGTTGTTCGCTCGTTCATTGATATGTCAAGCATGAACAAGCCTGATCCTGTCCAGAGTTGGAGTGCTTTAGCACTTATTGATTGCATGATGACATTAGATGGCCTTTTACCTTTCTTGACAGAAGAGATTATTGTAAAGGAGCTGCTTGAAGACCAAAATTGTGTACTCATCAGGGTTCTTATGCAGAAACATATGGACATTGCCGTGCTTCAGGTTGCTGCTACTACTCTCTTTGCAATATGTCAGCGAATTGGGGCAGATTTGACAGTATTGCATATTCTACCAAAGCTTAAAGAACTATTTGATGAGCTTGCTTTCCAGCAAATTTCTAAAGATTCAACTACTGTTACCAGAAATTTGAAGGTTGCCAAACTAAAAATTGTTGGGGACTTGCAAATTGAAAGCCGAATGGATCTAGTGTTGGTTCTCTATCCTTCGTTTGCCTCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTACAACTTGAACAATTTCTTCTACGGCAGCATAATTGGAAGTGGGAATGTGCAGGGGAATCATCAAAAGGTAGTTCAGAAAATTTTATTGGTAGAAGATCCACATTTGGCCAGGGTTCCACCTCTGAATACACTCCGGCAAAGCTGTTGCTTAATGGCGTTGGATGGTCAATTCCACAATCCCAAGGAAGTAAAAGTGCTAAGAACTTGATTCCTCAGAGACAATATTTTAAACGCAGTCAGAGTCAAGTAGCAACGCAAGAAGACACACCATACCAATTTAACCAAGAACCCTGGTTTTGGTTCCCCAGCCCCGCCACCGTATGGGATGGACCTGAATTTCTCGGGCGGGTGGGGGTTCAAAAAGATGACCTTCCATGGAAGATCAGAGCATCTGTGATATACTCTATACGTGCAAATCATGGAGCAGTGAGGTCTCTAGCTGTTGATCAAGATGAAAGTACTGTTTTCACTGCAGGAATTGGTCAAGGGTATAAAGGAACTATTCAGAAGTGGGAACTAAGCCGAACTAACTGTCTTTCTGGCTATTATGGACATGAGGAGGTTGTGAACAATATTTGCATCTTATCATCTAGTGGAAGAGTGGCGTCTTGTGATGGAACAGTTCATATTTGGAATAGTCAAACAGGGAAGCAAATATCAGTATTTGAAGAGTCCCAAACAGATCCTGCCCATACTGCAAGTGATCTATCCGCTGCATCAAAAATTAACATTGACCAGGCAAACATGCTCAATTTGAATACACTGTCAAATGGAATATTGTCTAGTACATTTGATTCAAGCCTTTATACTTGCATGCATCTATTAGACGCGGCTGAAACACTTGCCGTTGGCACTGGAAATGGTTCACTCAGGTTTATTGATGTTGCTCGAGGCCAAAAGCTTCATATGTGGAGAGGAGAATCTAATGAATCTAGTTTCCCTTCTCTTATTTCTTCCATTTGTTCCTCTGGATCTGACAAGATGCATGCAGGTGGAATTTCCACTTTGCCATCTTTTATTGCAGCTGGACTAAGTTCTGGTCATTGTAAATTATTTGATGCAAAGAGTGGAAATGTCATTTCCTCTTGGCGAGCTCATGATGGATATGTAACAAAATTGGCAGCACCCGAGGATCACATGCTCATATCCAGCTCTCTTGACAGAACTTTAAGAGTCTGGGATTTAAGAATGAATTTGCCATCGCAGCCCATTATTTTCAGAGGTCCTTCAGATGGCATATCCAGTTTCGCCATATGGGGCCAAGATGTTATTTCGATTTCCCGGAATAGGATTGGCCTTCTCTCCTTGCCTAAATCTGCCAATGAAATAGATGGACAGCATCATATCATTCCCCAGAAGCTCTATGTTTCAGATAACAATGGAATGAGGAGCTTGTCAGCATTATCAAGTATTAGTATACTTCCATTCTCTCGATTGTTTCTCATTGGGACAGAAGATGGTTATTTGAGAATCTGTTGTTAA 4962 0.4125 MEQHCCYCFDCLQLRINSDFSDQLLFNYGISSSPFPFGSSAVVQISGTAGSEASSGQFILQYTRSHHSNCFSNYVNEYILDSNEGTRSSDPDTGTSQCGPNVQNGGISSSSDAETKRASSMSTSCSHSGKFSCFRIITSLAPGARVEVSSFSTIQEVATDFLSGLMEDHVLDSLDIWIEGKASGRDSTNFLSLIGLPFFQEDTFPGSLRHPNIAPVLAFFKSSDHVNMVLPKTPYNLENILHFNPSAFKSDWHRGFLIYQLLSALVYLHGLGVSHGNLCPSNIMLTDSLWSWLRLWNEPTLEFNSTLQKSEDVNSSPAKISCYNSGCHSNGLYADLKLSPSIDWHSSFHHWWKGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSTKPDDNCDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLRVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFRSIHDGMADLAVPSWAETPEDFIKLHRWALESNMVSFQLHQWIDITFGYKMSGQAAIAAKNVMLPISEPTMPRSTGRRQLFTRPHPIRLATPTARRYATNKYAKVWSQENEILRETTLLSDAAYLQELEQASAFSEHARHLNSCYQCPLNQTQGDPTKQSINESICKLSLPDRNYMLPYKMNLISLIQHMKEEDDGSPGYPDYLLWRQKLSSSKVSSEDIARDIFSIGCLLAELHLSSPLFDSTSYAMYLEDGTLPGSLCELPPYVRLLVEACIQKDWTRRPSAKFLLESPYFPKTIKSSYTFLAPLQLVAKDETRLRYATNLAKKGALREMGSLAAEMCATYCLPLVVNTVNDAEAEWAYILLKEFMKCLKEKAVKKLILPTIQKILQTTGHLHLKVSLLQDSFVREIWNRVGKQVYLETIHPLVLSNLYNSLDKSSAASASVLLVGSSEELGVPITIHQTILPLVYCFGKGLCADGIDVLVRLGGLFGESFIVKQMLPLLKNVVRSFIDMSSMNKPDPVQSWSALALIDCMMTLDGLLPFLTEEIIVKELLEDQNCVLIRVLMQKHMDIAVLQVAATTLFAICQRIGADLTVLHILPKLKELFDELAFQQISKDSTTVTRNLKVAKLKIVGDLQIESRMDLVLVLYPSFASLLGIEKLRQCCATWLQLEQFLLRQHNWKWECAGESSKGSSENFIGRRSTFGQGSTSEYTPAKLLLNGVGWSIPQSQGSKSAKNLIPQRQYFKRSQSQVATQEDTPYQFNQEPWFWFPSPATVWDGPEFLGRVGVQKDDLPWKIRASVIYSIRANHGAVRSLAVDQDESTVFTAGIGQGYKGTIQKWELSRTNCLSGYYGHEEVVNNICILSSSGRVASCDGTVHIWNSQTGKQISVFEESQTDPAHTASDLSAASKINIDQANMLNLNTLSNGILSSTFDSSLYTCMHLLDAAETLAVGTGNGSLRFIDVARGQKLHMWRGESNESSFPSLISSICSSGSDKMHAGGISTLPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVTKLAAPEDHMLISSSLDRTLRVWDLRMNLPSQPIIFRGPSDGISSFAIWGQDVISISRNRIGLLSLPKSANEIDGQHHIIPQKLYVSDNNGMRSLSALSSISILPFSRLFLIGTEDGYLRICC* 1654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3488 1653 ProSitePatterns Trp-Asp (WD) repeats signature. 1541 1555 IPR019775 -
Ahy19g3488 1653 SMART WD40_4 1618 1653 IPR001680 GO:0005515
Ahy19g3488 1653 SMART WD40_4 1516 1554 IPR001680 GO:0005515
Ahy19g3488 1653 SMART WD40_4 1335 1372 IPR001680 GO:0005515
Ahy19g3488 1653 SMART WD40_4 1417 1454 IPR001680 GO:0005515
Ahy19g3488 1653 SMART WD40_4 1289 1332 IPR001680 GO:0005515
Ahy19g3488 1653 SUPERFAMILY BEACH domain 338 580 IPR036372 -
Ahy19g3488 1653 CDD Beach 351 580 IPR000409 -
Ahy19g3488 1653 SMART Beach_2 348 580 IPR000409 -
Ahy19g3488 1653 PANTHER GH12955P 7 1653 - -
Ahy19g3488 1653 Pfam Protein kinase domain 201 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3488 1653 Pfam Beige/BEACH domain 350 560 IPR000409 -
Ahy19g3488 1653 SUPERFAMILY Protein kinase-like (PK-like) 711 796 IPR011009 -
Ahy19g3488 1653 Gene3D - 1279 1397 IPR015943 GO:0005515
Ahy19g3488 1653 Gene3D Transferase(Phosphotransferase) domain 1 197 292 - -
Ahy19g3488 1653 ProSiteProfiles Protein kinase domain profile. 134 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3488 1653 SUPERFAMILY WD40 repeat-like 1292 1651 IPR036322 GO:0005515
Ahy19g3488 1653 ProSiteProfiles BEACH domain profile. 336 606 IPR000409 -
Ahy19g3488 1653 CDD PKc 207 288 - -
Ahy19g3488 1653 Gene3D Transferase(Phosphotransferase) domain 1 682 794 - -
Ahy19g3488 1653 ProSiteProfiles Trp-Asp (WD) repeats profile. 1523 1556 IPR001680 GO:0005515
Ahy19g3488 1653 Gene3D BEACH domain 341 580 IPR036372 -
Ahy19g3488 1653 Gene3D - 1398 1653 IPR015943 GO:0005515
Ahy19g3488 1653 Pfam WD domain, G-beta repeat 1337 1372 IPR001680 GO:0005515
Ahy19g3488 1653 Pfam WD domain, G-beta repeat 1518 1554 IPR001680 GO:0005515
Ahy19g3488 1653 SUPERFAMILY ARM repeat 834 1098 IPR016024 -
Ahy19g3488 1653 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1523 1556 - -
Ahy19g3488 1653 MobiDBLite consensus disorder prediction 82 128 - -
Ahy19g3488 1653 SUPERFAMILY Protein kinase-like (PK-like) 200 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3488 Ahy-Chr19 157586528 157594523 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Ahy19g3488 Beach 1.40E-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3488 K17601 - gmx:100809116 2689.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3488 19 157586528 157594523 Ahy9g2147 9 110404935 110412883 hybridization