Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3479 ATGAACGGCGCAGGGCCCACAGCCACAGCCACAGCCACCGCCACTGCCACCGCCACCTTCAGGTCTATCCTCGACAAGCCCCTTCACCAGCTCACCGAAGATGACATTTCCCAACTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCGTGGAACAAATCGCAGGCAATTCAGCAGGTCATTTCCCTGAAGGCGCTGCTCGAGCCCTCCAACGACGACGCCCCCGCCGTCGTTCCCACCCTCCATTCTACCTCGCCACCTCGGCCTCCGCCTCAGCCTCAAGGGGATTTGAACGATGCTCCGCCCGCTGAAGATCCGGCTCTTCATGCTGCCGATGACATTCAGAAATCTGCGTCGTCTCCCGAAAAACCCACTGAAACCAATGACACCAACGTTGTCAGTCCCAGGTGTTCGGTGATTTGCCTGTTAGTGAAGCAAGCATGTGCAACTAGCGGAGTCGGGCAAATGACGATATTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCTGATAAGGCACAGGCTATCATGCAACTTGCAGCAAGTCCAGTCCAATTTGCTCAGGATGATCCTGTAAACAGAAATACAACAGTCTGGGTTTCTCCTTGTCACATACCATTGGATAAGGATGTCCCAGTTCCTGTTGATACAACAATGGTGCAGGTTGCTCAAGCAGATAAGATGATGGAATATCCTCTGCATTACAGGGAGAAGGGAAGCATAGCTCGTGATGCTGATCTAGATGGTCAGGCAAGCAGACAAGTTTCATTGCAACGATATCGTGAAAAGCGAAAAGACAGGGGAAGATTGAAGGGCAAGAAATTGCCCGGGGTAACGTCATCTAACTTGGAGATGTATTTGAACCTTCCAGTGAAAATCCAGACCTCAAATGGCAATTCAAGCCGAAGTAGCACATGCTCCCCACCACAGCCTAGACCGCCTCTTGCTTTCAGTGGCTCGGCTGACAACCCGCTAAAAGTTGGCCTTCCCATTGATCTCAATGACAAAGATGTTCAAGAATGCTAA 1053 0.5119 MNGAGPTATATATATATATFRSILDKPLHQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPSNDDAPAVVPTLHSTSPPRPPPQPQGDLNDAPPAEDPALHAADDIQKSASSPEKPTETNDTNVVSPRCSVICLLVKQACATSGVGQMTIFYCGKVNVYDGVSPDKAQAIMQLAASPVQFAQDDPVNRNTTVWVSPCHIPLDKDVPVPVDTTMVQVAQADKMMEYPLHYREKGSIARDADLDGQASRQVSLQRYREKRKDRGRLKGKKLPGVTSSNLEMYLNLPVKIQTSNGNSSRSSTCSPPQPRPPLAFSGSADNPLKVGLPIDLNDKDVQEC* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3479 350 MobiDBLite consensus disorder prediction 119 138 - -
Ahy19g3479 350 ProSiteProfiles Tify domain profile. 156 191 IPR010399 -
Ahy19g3479 350 SMART tify_2 156 191 IPR010399 -
Ahy19g3479 350 MobiDBLite consensus disorder prediction 303 350 - -
Ahy19g3479 350 MobiDBLite consensus disorder prediction 253 286 - -
Ahy19g3479 350 Pfam tify domain 161 190 IPR010399 -
Ahy19g3479 350 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 17 324 - -
Ahy19g3479 350 MobiDBLite consensus disorder prediction 78 114 - -
Ahy19g3479 350 MobiDBLite consensus disorder prediction 89 104 - -
Ahy19g3479 350 Pfam Jas motif 259 276 IPR018467 -
Ahy19g3479 350 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 324 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3479 Ahy-Chr19 157538581 157543407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3479 15 319 Tify Gene Family AT4G14720 43.344 1.41e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Ahy19g3479 tify 1.40E-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3479 - - adu:107467071 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3479 19 157538581 157543407 Ahy19g3479 19 157538581 157543407 ECH
Ahy19g3479 19 157538581 157543407 Ahy9g2154 9 110463212 110467587 hybridization