Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3474 ATGGGGAAGGCAGGGAAATGGCTTAGAAACTTCTTGACAGGGAAGAAAGAAAGGGAAAAGGAGAAGGTGAAGGACAAATGTGGTGGTAATGCAACAAGTCTGAATTCTTCAAATGGAACAGAAAATCCAACCACTCCAAATTCCACAACCCCAAAGGAGAAAAGGAGATGGAGCTTTAGAAGATCATCTGCCACATCCACATCCACACCAACAACACCTTCCAAGGAATTGAACTTTGCAGAATCAAATGTCACTGCTTCACAGACACCACAAGCTGCTGCCACCACAGATATTCCTCTGGATGACGAGCAGAAGAAGCATGCCATGGCTGTGGCTGCTGCCACGGAGGCAGCAGCTGACGCGGCAGTGGCTGCAGCTCAGGCTGCGGCTGCTGTGATCCGCTTGGCTTCTGGTTCCAATGGAACAGCTGAAGAGGCTGCAGCCATCAAAATTCAATCTGTCTTTAGGTCCTACTTGGCAAGAAAAGCATTGTGTGCTCTCAGAGGACTAGTGAAGTTGCAGGCTCTGGTAAGGGGTCACTTGGTGAGAAAACAGGCCAAGGCAACACTGAGATGCATGCAGGCTTTGGTGACAGCACAGGCTAGAGCTCGTGCTCAGAGGATCCGAATTGCATCATCAGAAGGGAAGTCTTATCAGAAGCAATCAAGTTTCAGAAACACTACAGAGGAAGATTTATATGCTCAAGTGTATAATGAAATGGAGAGAGGCATGGAAGAGAACATCAAGATTGTGGAGATGGATGTCTGTGAATCAAAAGGAAACTCTAGAAGCAGAAGCAGCAGTGTGCATAAATTTCCAGCATATTATTCAAAAGAAGAAAACTTGAAGGTATCACCAGCTCCATCAGCCTTAACAGAGTTTAGTCCAAGAGCATGTAGTGGACACTTTGAGGACTGCTTCAGCACAGCACAGAGCAGCCCTCAATGCTACTCGGCCGCGTCTGGAGTTGACGATTCGAAGCATCCCTTCTCCTTCCCTAGGCCAGGCTATGCTGAGGTGATGTCCTATGACTACCCTTTGTTTCCAAATTACATGGCCAACACGGAATCATCAAGGGCCAAAGTGAGATCACATAGTGCACCAAAGCAAAGGCCTGATTCATTCGAGAGGCAGCTGAGCCGGCGAAGAGCTTCTGTGGAAGGAAGGAATGTGCCAAGGCCTGTGAGGATGCAGAGGTCATCTTCACATGTTGGTGCCACTAATCCATGGTCAGCAATCAAGCTTGATAGGTCCTCAGTTTCACTCAAGGACAGTGAGTGTGGATCAACAAGTACAGTCCTCACAAACACTAATTACTGCAGATCCCTTGTTGCATATCATCATCATGGAGATAGGTAG 1359 0.4753 MGKAGKWLRNFLTGKKEREKEKVKDKCGGNATSLNSSNGTENPTTPNSTTPKEKRRWSFRRSSATSTSTPTTPSKELNFAESNVTASQTPQAAATTDIPLDDEQKKHAMAVAAATEAAADAAVAAAQAAAAVIRLASGSNGTAEEAAAIKIQSVFRSYLARKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQARARAQRIRIASSEGKSYQKQSSFRNTTEEDLYAQVYNEMERGMEENIKIVEMDVCESKGNSRSRSSSVHKFPAYYSKEENLKVSPAPSALTEFSPRACSGHFEDCFSTAQSSPQCYSAASGVDDSKHPFSFPRPGYAEVMSYDYPLFPNYMANTESSRAKVRSHSAPKQRPDSFERQLSRRRASVEGRNVPRPVRMQRSSSHVGATNPWSAIKLDRSSVSLKDSECGSTSTVLTNTNYCRSLVAYHHHGDR* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3474 452 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 430 - -
Ahy19g3474 452 MobiDBLite consensus disorder prediction 61 95 - -
Ahy19g3474 452 SMART iq_5 166 187 IPR000048 GO:0005515
Ahy19g3474 452 SMART iq_5 143 165 IPR000048 GO:0005515
Ahy19g3474 452 MobiDBLite consensus disorder prediction 10 27 - -
Ahy19g3474 452 MobiDBLite consensus disorder prediction 359 406 - -
Ahy19g3474 452 Pfam IQ calmodulin-binding motif 146 164 IPR000048 GO:0005515
Ahy19g3474 452 Pfam IQ calmodulin-binding motif 171 187 IPR000048 GO:0005515
Ahy19g3474 452 ProSiteProfiles IQ motif profile. 144 172 IPR000048 GO:0005515
Ahy19g3474 452 MobiDBLite consensus disorder prediction 29 52 - -
Ahy19g3474 452 Gene3D - 143 195 - -
Ahy19g3474 452 ProSiteProfiles IQ motif profile. 168 195 IPR000048 GO:0005515
Ahy19g3474 452 PANTHER IQ-DOMAIN 5-RELATED 1 430 - -
Ahy19g3474 452 Pfam Protein of unknown function (DUF4005) 313 388 IPR025064 -
Ahy19g3474 452 MobiDBLite consensus disorder prediction 362 389 - -
Ahy19g3474 452 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3474 Ahy-Chr19 157472901 157475295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3474 1 443 IQD Protein Family AT4G14750 46.610 3.56e-108 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3474 - - gmx:100817667 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3474 19 157472901 157475295 Ahy19g3474 19 157472901 157475295 ECH
Ahy19g3474 19 157472901 157475295 Ahy9g2160 9 110522010 110524455 hybridization