Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3473 ATGGCCTCTCATTGTCCGAAAAGAGAATTAGGCCCTTTCCTGAGTCATCTCATTCTGATTCTGATATCCATCAACCCTTCACACCAATTTGAATACAAGGAAGAGCACAGCTCTTATCGGTTCCTCCCTCAACTAAATCCGAGGCTCTCAAAAGCCTACATAGCACTCCAAGCATGGAAGCATTCAATAGTGTCAGACCCAAAGAACATGACCCTCAACTGGTGTGGACCCCACGTGTGCAACTACACCGGAGTCTACTGTGCACCAGCACCAGATAACCCCCACATATACACCGTTGCAGGAATTGACCTAAACCATGGCAACATAGCTGGTTCGTTACCACAACAACTTGGCCTCTTAACTGACCTGGCACTCTTCCACATCAACTCTAACCGTTTCTGTGGCTCCGTCCCAACAACCTTCAACGGCCTCAAACTCCTCTTCGAGCTTGACGTCAGCAACAACGATCTCTCTGGCCCCTTTCCAGAAGTTGTTCTATGCCTCCCTTCGCTCAAATACTTAGACATAAGGTTCAACAACTTCCACGGCGCTATTCCCACGCGCCTCTTCGACCTCAAACTCGACGCGCTCTTCATCAACAACAACAACTTCCAGTTCTCCTTGCCGGAGAATTTCGGAAACTCAACGGCCTCGGTTATTGTGTTCGCCAACAACAATCTGAGGGGATGTTTCCCGTCGAGTGTGGCGAAGATGAAGGACACGCTGAACGAGATCATAATTACGAATAGCGGGATAACGGGTTGTTTACCGCGTGAGATAGGGTTGTTGGAGAGAGTAACGGTTTTCGATGTGAGCTTCAACAAGATCGTTGGGGAATTACCAGAATCAATTGAAGGGATGAAGAAGTTGGAACAGTTGAACGTGGCGCATAACATGCTGTCTGGCATCATTCCCGAGAGTGTGTGCAACTTGCCGAGGCTGCAGAACTTTACGTACTCCTATAACTACTTCTGCGATGAATCTCCGCTGTGTTTGAAGCTTCCGGATAGTGATGATCGCAAGAACTGTATTCCTTATAGGCCGCTGCAACGGTCCCTTCAGGAATGTGCCGCTTTTTATAAACATCCGGTTCAATGTGCTGCCTTTGGTTGCTCAACAACTGCACCGCCGCCGCCAGCACCACCTCCACCTCCACCTCCACCTCCACCACCGCCTCCACCACCACCACCTCCTCCTCCTCCTCCACCTCCACCACCACCGCCATACTACCAGTATCCGTGA 1242 0.5008 MASHCPKRELGPFLSHLILILISINPSHQFEYKEEHSSYRFLPQLNPRLSKAYIALQAWKHSIVSDPKNMTLNWCGPHVCNYTGVYCAPAPDNPHIYTVAGIDLNHGNIAGSLPQQLGLLTDLALFHINSNRFCGSVPTTFNGLKLLFELDVSNNDLSGPFPEVVLCLPSLKYLDIRFNNFHGAIPTRLFDLKLDALFINNNNFQFSLPENFGNSTASVIVFANNNLRGCFPSSVAKMKDTLNEIIITNSGITGCLPREIGLLERVTVFDVSFNKIVGELPESIEGMKKLEQLNVAHNMLSGIIPESVCNLPRLQNFTYSYNYFCDESPLCLKLPDSDDRKNCIPYRPLQRSLQECAAFYKHPVQCAAFGCSTTAPPPPAPPPPPPPPPPPPPPPPPPPPPPPPPPPPYYQYP* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3473 413 Gene3D Ribonuclease Inhibitor 218 343 IPR032675 -
Ahy19g3473 413 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 19 385 - -
Ahy19g3473 413 Gene3D Ribonuclease Inhibitor 51 217 IPR032675 -
Ahy19g3473 413 Pfam Leucine rich repeat 265 322 IPR001611 GO:0005515
Ahy19g3473 413 Pfam Leucine rich repeat 124 181 IPR001611 GO:0005515
Ahy19g3473 413 MobiDBLite consensus disorder prediction 374 413 - -
Ahy19g3473 413 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 19 385 - -
Ahy19g3473 413 SUPERFAMILY L domain-like 54 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3473 Ahy-Chr19 157465701 157467189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3473 43 381 Leucine-rich Repeat extension Gene Families AT3G22800 67.353 4.50e-159 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3473 - - adu:107467112 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3473 19 157465701 157467189 Ahy19g3473 19 157465701 157467189 ECH
Ahy19g3473 19 157465701 157467189 Ahy9g2161 9 110533202 110534595 hybridization