Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3470 ATGGACACTCCCGACAGGGCCACCACCACCAACAACCTCAATCCCCCCAAATTTGAGGATTCACCGGTATTTAACTTTCTCAATAGTCTATCTCCTATAAAGCCAGTTAAATCTGTTCACATTACCCAGACCTTCAGTTCAATTAGCTTTTCATCCCCTCCATCGGTTTTCACATCACCCCATGTCAACTCTAACAAGGAATCCAGATTCCTGAGGAGGCATAACCTTTTAGACACATCAAAGCCAAAGGTTACATCTGAGGATGAAAATCAAACTGGTTCAGGTGAACAGGCTCTTACAGATTCAACTCATGCACGTAATAACTCAAGGGAGTTAGAGAAAAATGCTGATAAAGGAACTTCCATAGGGGATGCCTCAATTGAGCCAGCCAGTGAACAAGCAAAGTTTTCAATCGAGCTGCCACAGACCTTAAAGTATGAGTCTGGTAGCCCTGGATATGATCCTATACTTTGTGGTGATGAGGCTAATACACTTCTGTCATTGCCTTCTTCTGAGGCAGCACCAGATGTTGCCTGCAGTCATGAATCCTCTAAAAAGAATTTGGTGGAGGGTGAACTGCATCTCCACGGAATATGTCAGACTGAGCCGAAAATTGATGGCACCGAGTGTGATTGGGATAATTTAATTAATAATGCATCTGATATGTTAATTTTTAGTTCTCCAAACGTCTCAGAAGCTTTTAAGGATCTAATGAATAAACAATTGGACCCTTCTGGACGTATAATGCACATTGTCAATCAAGTTGCTTCTGGATCAGGACATGAAAATGAAGATCATCCTCCCAAACCAGGACTAGCTTCAGACACACAATACACACAGGAAAATATTGCTAATGTTGCTTTGGTGGCTAGCAATCCATGTGAGAAAATGGATGATGAGCATGTTTATGTTATACACCGTGGTATACGGAGGCGCTGTCTAGACTTTGAGATGGCCAGCGTTCGCAGAAATAACTCAGATGGCAATTCAAATTCAAGTTCCAATGCAACAAAGTCTGATGAGAGGAATACTGGTGGTGATTCAAGGAGGTGCTTTTTGCCGGGAATTGGTTTACACTTGAATGCGCTTGCAACTTTGAAGGAGCACCGTGGCATGAAAAATGAAAAGTCTTCTTCTGGAAGACAACTTAACATTCCCAGCTCCACTTCTTCCTTGTTACCGCAAGAACATCATCTATTATTGCTACCTGCATCCTCTGAAAGAGATATGGAGCTGCCAGAGAATGAGGTTCAGCCTGTCGAAGATTGTAGTCAGTCATTATCTCTCATGGCCGTTGAAGAATTCAATCAGAATAGCCCCAAAAAGAAAAGGCGGAAGGTGGAAACAGCTGGAGAAAGTGAGTCTTGCAAACGGTGTAATTGTAAGAAATCAAAATGTTTGAAGCTTTATTGCGAGTGCTTTGCTGCTGGAGTCTACTGTATAGAACCTTGCTCTTGTCAAGATTGCTTCAATAAACCTATTCATGAAGATACTGTTCTTCAAACTCGCAAGCAGATTGAGTCGCGTAACCCGCTTGCATTTGCTCCCAAAGTCATCAGAAGTTCTGATTCTGTTTCTGAAATTGCGGATGATCCAAACAAAACTCCAGCTTCGGCACGACACAAAAGAGGATGTAATTGCAAGAAATCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGATGCGAAGGCTGCAAGAACGCATTCGGTAGAAAGGATGGTTCTGCAGGAATAGATGCTGAGGCAGAAGAAGAGACAGAAGCATCGGAAAAGGGCGAGGTGGAAAAGGCTTTGCAGAAAACTGAAATTCAGAATATTGAAGAAAATCAGAATTCTGCTCTTCAAGCAACACCATTACGGCTTTCCAGACCATTGCTTCCATTGCCCTTCTCATCGAAGGGAAAGCCGCCTAGATCTTTTATTGCTACGATCTCTGGTTCTGCATTGATTGCCAGCCAAAAGCTTGGTAAACCAAATATTCTTAGGCCTCAAGTTAAGTTAGAAAAGCCTCATCAAACTGTAGCAGATGATGAAATGATGGACATTATCCAAGGTGATAGCTCTCCTATCGCTTGCATAAAAACCTCTTCTCCCAATGGCAAAAGGATTTCCTCTCCTAATTGTGAACTTGGATCATCTCCAACTCGCAGAGGTGGCAGGAAGTTGATATTACACTCCATCCCTTCTTTTCCTTCCCTCACTCATCACCATTAG 2244 0.4256 MDTPDRATTTNNLNPPKFEDSPVFNFLNSLSPIKPVKSVHITQTFSSISFSSPPSVFTSPHVNSNKESRFLRRHNLLDTSKPKVTSEDENQTGSGEQALTDSTHARNNSRELEKNADKGTSIGDASIEPASEQAKFSIELPQTLKYESGSPGYDPILCGDEANTLLSLPSSEAAPDVACSHESSKKNLVEGELHLHGICQTEPKIDGTECDWDNLINNASDMLIFSSPNVSEAFKDLMNKQLDPSGRIMHIVNQVASGSGHENEDHPPKPGLASDTQYTQENIANVALVASNPCEKMDDEHVYVIHRGIRRRCLDFEMASVRRNNSDGNSNSSSNATKSDERNTGGDSRRCFLPGIGLHLNALATLKEHRGMKNEKSSSGRQLNIPSSTSSLLPQEHHLLLLPASSERDMELPENEVQPVEDCSQSLSLMAVEEFNQNSPKKKRRKVETAGESESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLQTRKQIESRNPLAFAPKVIRSSDSVSEIADDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSAGIDAEAEEETEASEKGEVEKALQKTEIQNIEENQNSALQATPLRLSRPLLPLPFSSKGKPPRSFIATISGSALIASQKLGKPNILRPQVKLEKPHQTVADDEMMDIIQGDSSPIACIKTSSPNGKRISSPNCELGSSPTRRGGRKLILHSIPSFPSLTHHH* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3470 747 MobiDBLite consensus disorder prediction 48 128 - -
Ahy19g3470 747 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 746 IPR044522 GO:0003700
Ahy19g3470 747 MobiDBLite consensus disorder prediction 322 341 - -
Ahy19g3470 747 ProSiteProfiles CRC domain profile. 455 580 IPR005172 -
Ahy19g3470 747 MobiDBLite consensus disorder prediction 322 350 - -
Ahy19g3470 747 MobiDBLite consensus disorder prediction 370 389 - -
Ahy19g3470 747 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 543 578 IPR005172 -
Ahy19g3470 747 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 457 492 IPR005172 -
Ahy19g3470 747 SMART CXC_2 540 581 IPR033467 -
Ahy19g3470 747 SMART CXC_2 454 495 IPR033467 -
Ahy19g3470 747 MobiDBLite consensus disorder prediction 48 65 - -
Ahy19g3470 747 MobiDBLite consensus disorder prediction 706 730 - -
Ahy19g3470 747 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 746 - -
Ahy19g3470 747 MobiDBLite consensus disorder prediction 256 275 - -
Ahy19g3470 747 MobiDBLite consensus disorder prediction 1 21 - -
Ahy19g3470 747 MobiDBLite consensus disorder prediction 706 722 - -
Ahy19g3470 747 MobiDBLite consensus disorder prediction 86 105 - -
Ahy19g3470 747 MobiDBLite consensus disorder prediction 66 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3470 Ahy-Chr19 157438935 157443510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3470 18 747 CPP Transcription Factor Family AT4G14770 45.733 2.18e-168 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Ahy19g3470 TCR 1.80E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3470 - - adu:107467046 1422.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3470 19 157438935 157443510 Ahy19g3470 19 157438935 157443510 ECH
Ahy19g3470 19 157438935 157443510 Ahy9g2164 9 110571926 110576618 hybridization