LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy19g3469	ATGAAGCGTAGTGGGAACCTAAGCTGCAAAGATATGCTGTTTAGAGCTGATAAGATTGATCTCAAGAGTTTGGACGATGAGCTAGAAAAACACCTTACTAGGGTTCTGTCTAGACATATTGAGGCCAAAAGGCCTAAAGAAGAGTGGGAGATTGATTTGGCAAAACTAAATTTGCAACATGTTGTGGCGAATGGGGCCTATGGCACTGTCTATAAGGGCACCTATGATGGCCAAGATGTTGCAGTGAAAGTGTTGGATTGGGGTGAGGATGGTGGTGCTTCTGCTGCTTCCTTAAGAGCATCATTCCAGCAGGAGGTTACTGTTTGGCAAAAACTTGATCATCCAAACGTTACAAAATTTGTTGGAGCTTCAATGGGGACATCAAACCTCCGAATTCCAAGAGAAGCCGGAGGCCAAGATTCTCTCCCTACTCAAGCATGTTGCGTGGTTGTTGAGTTCATCCCCGGTGGAACTCTGAAAAATTACTTGTTTAAGAACAGACGGAGGAAACTTCCTTACAAGACTGTGATTCAGCTGGCTTTGGATCTCTCTCGAGGTCTTAGTTATCTACATTCGAAAAAGATCGTGCATCGTGATGTTAAAACAGATAATATGTTGCTCGATATGAATCGAAATTTGAAAATAGCTGATTTTGGAGTTGCTCGTGTGGAAGCTTTGAATCCAAATGAGATGACAGGTGAAACAGGAACCATTGGATATATGGCACCAGAGGTTTTAGTAGGCAAGCCTTACAATAGAAGATGTGATGTGTATAGCTTTGGCATTTGCTTGTGGGAAATATACTGTTGTGATATGCCATATTCGACACGAAGCTTTGTTGATGTCTCGTCGGCAGTTACTCATCAGAATTTGCGACCGGATATTCCTCGATGCTGCCCGAGTGCATTGGCGAACATCATGCGAAAATGCTGGGATGGGAACCCGAACAAGCGGCCGGAGATGGGTCAGGTGGTGCAAATGTTGGAAGCAATTGATACCAGCAAAGGAGGAGGGATGCTGCCTGATGATCAGGCTCCATTTTGTTTCTGTTTTGGAACAGTTCGTGGTCCTTAG	1074	0.4432	MKRSGNLSCKDMLFRADKIDLKSLDDELEKHLTRVLSRHIEAKRPKEEWEIDLAKLNLQHVVANGAYGTVYKGTYDGQDVAVKVLDWGEDGGASAASLRASFQQEVTVWQKLDHPNVTKFVGASMGTSNLRIPREAGGQDSLPTQACCVVVEFIPGGTLKNYLFKNRRRKLPYKTVIQLALDLSRGLSYLHSKKIVHRDVKTDNMLLDMNRNLKIADFGVARVEALNPNEMTGETGTIGYMAPEVLVGKPYNRRCDVYSFGICLWEIYCCDMPYSTRSFVDVSSAVTHQNLRPDIPRCCPSALANIMRKCWDGNPNKRPEMGQVVQMLEAIDTSKGGGMLPDDQAPFCFCFGTVRGP*	358

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy19g3469	357	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	195	207	IPR008271	GO:0004672\|GO:0006468
	Ahy19g3469	357	PANTHER	KINASE ATMRK1, PUTATIVE-RELATED	2	350	-	-
	Ahy19g3469	357	CDD	STKc_MAP3K-like	65	328	-	-
	Ahy19g3469	357	PIRSF	ILK	21	337	-	-
	Ahy19g3469	357	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	2	350	-	-
	Ahy19g3469	357	SMART	serkin_6	56	331	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy19g3469	357	Gene3D	Phosphorylase Kinase; domain 1	45	136	-	-
	Ahy19g3469	357	Gene3D	Transferase(Phosphotransferase) domain 1	156	338	-	-
	Ahy19g3469	357	ProSiteProfiles	Protein kinase domain profile.	56	331	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy19g3469	357	Pfam	Protein tyrosine and serine/threonine kinase	56	328	IPR001245	GO:0004672\|GO:0006468
	Ahy19g3469	357	PRINTS	Tyrosine kinase catalytic domain signature	151	164	IPR001245	GO:0004672\|GO:0006468
	Ahy19g3469	357	PRINTS	Tyrosine kinase catalytic domain signature	189	207	IPR001245	GO:0004672\|GO:0006468
	Ahy19g3469	357	PRINTS	Tyrosine kinase catalytic domain signature	255	277	IPR001245	GO:0004672\|GO:0006468
	Ahy19g3469	357	PRINTS	Tyrosine kinase catalytic domain signature	299	321	IPR001245	GO:0004672\|GO:0006468
	Ahy19g3469	357	SUPERFAMILY	Protein kinase-like (PK-like)	42	328	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy19g3469	Ahy-Chr19	157429438	157431227	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy19g3469	5	357	MAP Kinase Kinase Kinase	AT3G22750	75.630	0.0	575

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Ahy19g3469		PK_Tyr_Ser-Thr	1.40E-59	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy19g3469	-		-	gmx:100803917	596.66