Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3453 ATGAAGGAAGAGAGAGAGTGTAAGATTGCAAAACGATCCAAGATGTCAAAGCTGTTCTCAAAGCACCTTCACCTCTGCTTCTTCAAGCTGAAGCACCATCCAACCATCCTCTCTCCGTCACCGTCACCGTCCACTCCCACAAGCACCTCCAACTTAACTACCTCCCACTCCTCCGAAGACCCACCTGACTTGGCCTCACTCTTCGCCTCCGACAGGTTCTTCTTCTCGTCGCCGGGCACCTCGAACTCCATCATAGAGTCCCCGGACACGCGTGCCTCCATACCAAGCGGCGGAGTGAAGGTTCCAAAGTACTCGGTGGACCCCTACGTGGATTTCTTCCGCTCAATGCAAGAAATGATTGCTTCACGACGGCGGGGTTTGGATGTGAACAAAGACTGGGACTATCTCCACGATCTTCTCTTGTGCTACCTGGCTCTCAATCCATCACACACCCACAGGTACATTGTTCGCGCCTTCACCGATCTCGTCGTTGACCTTTTGTCGTCTTCGTCGTCGTTGCCTTCACCGCCGGTAGTGAAATCCAAGTCTTGCCGGAGACTCAAGAACCATCGGCATAGTTCTAGTTTCTCAGGGCAGTTGGTGTAG 606 0.5297 MKEERECKIAKRSKMSKLFSKHLHLCFFKLKHHPTILSPSPSPSTPTSTSNLTTSHSSEDPPDLASLFASDRFFFSSPGTSNSIIESPDTRASIPSGGVKVPKYSVDPYVDFFRSMQEMIASRRRGLDVNKDWDYLHDLLLCYLALNPSHTHRYIVRAFTDLVVDLLSSSSSLPSPPVVKSKSCRRLKNHRHSSSFSGQLV* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3453 201 Pfam Transcriptional repressor, ovate 105 166 IPR006458 -
Ahy19g3453 201 ProSiteProfiles OVATE domain profile. 101 165 IPR006458 -
Ahy19g3453 201 MobiDBLite consensus disorder prediction 37 61 - -
Ahy19g3453 201 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 100 168 IPR006458 -
Ahy19g3453 201 PANTHER TRANSCRIPTION REPRESSOR OFP12 37 172 - -
Ahy19g3453 201 MobiDBLite consensus disorder prediction 42 61 - -
Ahy19g3453 201 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 37 172 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3453 Ahy-Chr19 157250625 157253033 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ahy19g3453 Ovate 1.10E-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3453 - - adu:107466913 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3453 19 157250625 157253033 Ahy19g3453 19 157250625 157253033 ECH
Ahy19g3453 19 157250625 157253033 Ahy9g2179 9 110715049 110717347 hybridization