Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3421 ATGCTGCACCTCAAAATCTCTTGTGCTCCTTATCCTTTGTTTTGTTTGATCACTCTGAGCGTTGTTGCATTAATAACTACAGAAGCAGTTACTGATGAGACCTACGCGGTTCACTACTGTCCAAACACAACAACTTATTCTCCCAACAGCATTTACCAAACTACCCTCAACCAGCTCCTTTCATGGCTCACGTCAAACTCCTCAACCGCCAAAAACGGTTACTACAACACTACCATCGGCGCCAACACCCCTAACAACACCATCTACGGCTCCTTCCTCTGCCGTGGAGACCTCACCACCACCGCATGCCACGACTGCGTTTCCGCCGCAGCCAAAAAGGTTCTTCAACCTGATTTCTGCCCCGTGGGGAAGGAATCGGTTATATGGTTCGCAGAGTGCATGGTTCGTTACTCGGACCAACCGTTTTTCTCTGTAGCTGCTGAGGTTCCTGTGTATTCCCTATCCAACACGGGAAACGTGCCAGATGAAAGCCACTTCATGACGGTGTTAGGAGACACGATGAATTCGGCGGCGGAACAGGCGGCCAAGGGTGGCGCTGACAAGAAGTTTGGTACCAAAGAAGCAAACATTTCAAGCTTCCAGACTCTATACACGCTAGCACAGTGCACACCGGATTTGTCAGAATTTGGATGCCAGAAATGCCTCAAAATAGGAACTGGACAATTACCTTCTTGCTGTGATGGAAAGTTAGGAGGAAGAGTGCTGATTCCAAGTTGTAATGTTAGGTTTGAATTGTACCCCTTTTACCATGAGATGGATGTCCCTCTGCCACCACCACAGTCCAACCCAAACCCAAAAGTTCAAATTTCCAGCGTAGAGTTCTTGCAATTTGATGTTGATACAATCATAGAGGCCACAAACAACTTTTCTGGTGGCAATAAATTAGGGGAAGGAGGATTTGGTGAGGTTTACAAGGGTACACTACCTAATGGGCAAGATATTGCTGTGAAGAGACTATCAAGAAACTCTAGACAAGGAATAATTGAGTTTAAGAATGAGGTACTTTTGGTAGCCAAACTCCAACATAGAAATCTTGTTAGGCTACTCGGATTTTGCTTGGATGGAGAAGAGAAAATGCTCATCTATGAATTTGTTGCAAACAAAAGCTTGGACCGTTTTCTATTTGATGCCAGCAAACAACACCAGTTGAGTTGGCCAAGACGATACAAAATCATAGAAGGAATTGCTCGAGGGATACTCTATCTTCATGAAGATTCCCGACTCAGAATCATACATCGTGATCTTAAAGCCGGTAATATACTACTAGACGAGGACTCAAACCCAAAAATCTCAGATTTTGGAATGGCAAGACTTTTCGGTGCTGATCAAACTCAAGCAAACACCAATAGAGTTGTTGGAACAATTGGATACATGCCTCCAGAATATGCAATGCGTGGACAATTTTCTGATAAAACGGATGTCTACAGCTTCGGTGTCTTAGTTCTAGAGATAATATCAGGAAAGAAGATAACATCCTTCTATGATTCAGGCTATGCAGGGGACCTCTTGAACTATGCTTGGAAACATTGGAGAGATGGGACCCCATTGGAGCTACTAGACATGAGTCTGAGAGAATCATATTCAAGAGCCGAAGTGATTAAATGCATCCATGTTGGGTTATGCTGTGTACAAGAGGATCCAGCACAAAGACCAACAATGCAGGCTATAGTTCTAATTCTAAATAGCCATACAGTTACTCTTGCAAGTCCTGCACAACCACCAGCTGGTTATATTGGGAGCAGATCTCACTCCAATTTCCCAACAAAAGAGATGGTGAACTCATCATCAGACAAGTCTACAAACACAAGCACAAGTCAGAGTTCAATAAATCGGCCAACTTTGCCATCAAAGGAGATGGAAAACTCAAATGTGTCTACCTCCATTACAGAGGTCTACCCTCGCTAG 1926 0.4408 MLHLKISCAPYPLFCLITLSVVALITTEAVTDETYAVHYCPNTTTYSPNSIYQTTLNQLLSWLTSNSSTAKNGYYNTTIGANTPNNTIYGSFLCRGDLTTTACHDCVSAAAKKVLQPDFCPVGKESVIWFAECMVRYSDQPFFSVAAEVPVYSLSNTGNVPDESHFMTVLGDTMNSAAEQAAKGGADKKFGTKEANISSFQTLYTLAQCTPDLSEFGCQKCLKIGTGQLPSCCDGKLGGRVLIPSCNVRFELYPFYHEMDVPLPPPQSNPNPKVQISSVEFLQFDVDTIIEATNNFSGGNKLGEGGFGEVYKGTLPNGQDIAVKRLSRNSRQGIIEFKNEVLLVAKLQHRNLVRLLGFCLDGEEKMLIYEFVANKSLDRFLFDASKQHQLSWPRRYKIIEGIARGILYLHEDSRLRIIHRDLKAGNILLDEDSNPKISDFGMARLFGADQTQANTNRVVGTIGYMPPEYAMRGQFSDKTDVYSFGVLVLEIISGKKITSFYDSGYAGDLLNYAWKHWRDGTPLELLDMSLRESYSRAEVIKCIHVGLCCVQEDPAQRPTMQAIVLILNSHTVTLASPAQPPAGYIGSRSHSNFPTKEMVNSSSDKSTNTSTSQSSINRPTLPSKEMENSNVSTSITEVYPR* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3421 641 Pfam Salt stress response/antifungal 40 139 IPR002902 -
Ahy19g3421 641 Pfam Salt stress response/antifungal 158 253 IPR002902 -
Ahy19g3421 641 ProSiteProfiles Gnk2-homologous domain profile. 148 255 IPR002902 -
Ahy19g3421 641 Gene3D - 148 255 IPR038408 -
Ahy19g3421 641 Gene3D - 32 142 IPR038408 -
Ahy19g3421 641 SUPERFAMILY Protein kinase-like (PK-like) 281 585 IPR011009 -
Ahy19g3421 641 ProSiteProfiles Protein kinase domain profile. 296 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3421 641 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 268 600 - -
Ahy19g3421 641 SMART serkin_6 296 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3421 641 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Ahy19g3421 641 Gene3D Phosphorylase Kinase; domain 1 266 371 - -
Ahy19g3421 641 Pfam Protein tyrosine and serine/threonine kinase 299 565 IPR001245 GO:0004672|GO:0006468
Ahy19g3421 641 CDD STKc_IRAK 302 568 - -
Ahy19g3421 641 ProSiteProfiles Gnk2-homologous domain profile. 34 142 IPR002902 -
Ahy19g3421 641 Gene3D Transferase(Phosphotransferase) domain 1 372 576 - -
Ahy19g3421 641 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 268 600 - -
Ahy19g3421 641 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 264 - -
Ahy19g3421 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Ahy19g3421 641 MobiDBLite consensus disorder prediction 585 641 - -
Ahy19g3421 641 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 16 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3421 Ahy-Chr19 156954377 156957685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3421 4 641 Receptor kinase-like Gene Family AT4G05200 47.067 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy19g3421 PK_Tyr_Ser-Thr 1.00E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3421 - - fve:101313967 683.715