Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3399 ATGGTGAGGGTTAGTGTTTTGAATGATGCTCTCAAGAGCATGTACAATGCTGAGAAACGTGGGAAGCGCCAAGTCATGATTAGGCCATCATCAAAAGTGATCATCAAATTCCTTTTGGTGATGCAGAAGCATGGCTACATTGGGGAGTTTGAGTATGTAGATGATCACAGAGCTGGCAAAATTGTGGTCGAGTTGAATGGTAGATTGAACAAGTGTGGGGTTATTAGTCCTCGCTTTGATGTCGGCGTGAAAGAGATAGAAAGTTGGACTGCGAGGTTGCTTCCCTCAAGACAGTTTGGGTATATTGTTTTGACTACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAACGCTGGGGGTAAAGTGTTGGGATTCTTCTACTAG 393 0.4427 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIESWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNAGGKVLGFFY* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3399 130 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Ahy19g3399 130 ProSitePatterns Ribosomal protein S8 signature. 100 117 IPR000630 GO:0003735|GO:0005840|GO:0006412
Ahy19g3399 130 SUPERFAMILY Ribosomal protein S8 4 130 IPR035987 GO:0003735|GO:0005840|GO:0006412
Ahy19g3399 130 Gene3D - 1 69 - -
Ahy19g3399 130 PANTHER OS02G0478600 PROTEIN 1 130 - -
Ahy19g3399 130 Hamap 30S ribosomal protein S8 [rpsH]. 2 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Ahy19g3399 130 Pfam Ribosomal protein S8 7 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Ahy19g3399 130 Gene3D - 70 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3399 Ahy-Chr19 156805550 156807170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3399 1 130 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.154 2.42e-92 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3399 K02957 - cit:102625104 257.684