Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3385 ATGTTTTCCATGGACATGGACATGAAACAAAGTAGTGTAAAGTCCCTTTCTAAAAGAAATCAACAAAGGTTGGCTAAGCTAATAAAGAATGTGCATTTGAAGAGCATGATCATCAAAATAATAAAGTTTCTGCTGCTACTCTCCATCACATGGTTTTGTTCTTCTTCTACAACTACTTCACCAGATACCAATTTCCCACATGTCTGTAACTGCACAAGAAACAGCACCTTTGAGTTAAACAGCACCTACCATACCAACCTCAAAACTCTTTTTTCTTGGCTTTCTTCCAATGCCACTAACTCTGCCGGATCCCACATCACCAAGGTTTCTTCTGGTAACAGCAGTGTCTATGGCCTCTTCCAGTGCAATGCAGATATAACTTCAGAGAAATGCCAAAAGTGCATCGATCAGGCAGTGTATAATGTAACATCAGAGTGTGAAACATCAAAGGAAGCTGTGGTATTTGTCAGATTCTGCTTCCTACGTTACTCTTACAGAGATTTCTTAACCATAGCAGAAGAAAGCCCTAAAATCTTCTTGCTGAACCTCAAGGACTACGTTGGCCAACTTGCTACGTTCAACAATGAAGTGTCGGAGATGATGTATACTCTGAGGCATAAGGTTGCTGATATTCCCATGGGTTCTAGAAGGTTCGCGTACGGGGAACTCAACATCACAGCTAAACAAAGCCTTTATGGCATGGCAAAGTGCACCCCGGACTTGCCCCCTGAGGAATGCAGCTCGTGTCTTGTGAACGCCGCGGCCGACATTCCGACCGGTTGTTGCAAAGGAAAGATCGGAGGAAGGGTTCTTTTTCCCAGTTGTGGCGTTAGATTTGAGCTTTATCGATTTTATGAGCCATCATCTCATCTCAATATTTTGAGACTTGGAGGAAATAGGAAAAACAGGTCACACCAGAGACAGATTATTATTTCCATCATCTCAACTGTTGTTTCTGTGCTGCTGCTATGTTTTGGCTGCTCTTTATGTTTCCTAAGTCGACGACGACAAAGGAAGCTTCTTAGGGGAATTCTTCTTAGAGAAAGCTTTGGGGATGAATCATTGGCTTCTTTTGAGTCTTTACAATTTCAGTTGAGTGAAATTCAAGCTGCTACCAACAACTTCTCCCAAGGAAACAAGATAGGAAGAGGTGGATTTGGGGAAGTTTACAAGGGTGTTCTTGAAAATGGGCAAGAAGTAGCAGCAAAGAGACTCTTGGGAAACTCTTGGCAAGGTGCAGAAGAATTTAAGAATGAGGTTCTTGTTATGGCCAAGCTTCAACATAAAAATCTGGTCAGATTACTGGGGTTTTGTTTGGAAGGACAAGAGAGGATACTTGTCTATGAATATGTCCCCAACAAGAGCCTTGACTACATTTTATTTGATCCTCAGAGAAGCAGGCCATTAACTTGGTCTGAACGATACAACATTATTAGAGGAATTGCGCGAGGGATTTTATACCTTCATGAAGATTCTCGTTTAACGATCATCCATCGAGATCTTAAACCAAGTAATATTTTATTAGACGATAGTATGAATCCAAAAATATCAGATTTTGGTATGGCAAGAATAGTAATTACAGATCAAATTCAAGTGAATACTCATAGGGTTGTTGGCACATATGGTTATATGTCTCCAGAATATGCAATGGAAGGAATGTTTTCAATAAGATCTGACGTGTATAGTTTTGGAATCATAGTACTTGAGATTATTAGTGGAAAATCGAAAAGTTCTTTTTGTGAATCACACTTCTCAGATGACATCCGACTTTCTGCATGGGCAAAATGGAAGGAAGAAAAGCCATTGGAATTATTGGATACAACTTTAAAAGGAAATTATTCTGAAAATGAAGTGATGAGAAGTATACAGATTGCACTGTTATGTGTTCAAGATGATCCAAATGAGAGGCCTACAATGACAGAAATTGTGTCATACCTCAATAGTTCTTCAGGGGAAGTACCTTTGCCTCAAGAACCAATACTTTCAAAGAGTAAAAAGATGGATTATATGTCTTACTACCACAAAACGCATTCCATAAATGATTCTATCAACGATTTGTCAGTGAGCACATTTCTCCCTAGATAA 2085 0.3962 MFSMDMDMKQSSVKSLSKRNQQRLAKLIKNVHLKSMIIKIIKFLLLLSITWFCSSSTTTSPDTNFPHVCNCTRNSTFELNSTYHTNLKTLFSWLSSNATNSAGSHITKVSSGNSSVYGLFQCNADITSEKCQKCIDQAVYNVTSECETSKEAVVFVRFCFLRYSYRDFLTIAEESPKIFLLNLKDYVGQLATFNNEVSEMMYTLRHKVADIPMGSRRFAYGELNITAKQSLYGMAKCTPDLPPEECSSCLVNAAADIPTGCCKGKIGGRVLFPSCGVRFELYRFYEPSSHLNILRLGGNRKNRSHQRQIIISIISTVVSVLLLCFGCSLCFLSRRRQRKLLRGILLRESFGDESLASFESLQFQLSEIQAATNNFSQGNKIGRGGFGEVYKGVLENGQEVAAKRLLGNSWQGAEEFKNEVLVMAKLQHKNLVRLLGFCLEGQERILVYEYVPNKSLDYILFDPQRSRPLTWSERYNIIRGIARGILYLHEDSRLTIIHRDLKPSNILLDDSMNPKISDFGMARIVITDQIQVNTHRVVGTYGYMSPEYAMEGMFSIRSDVYSFGIIVLEIISGKSKSSFCESHFSDDIRLSAWAKWKEEKPLELLDTTLKGNYSENEVMRSIQIALLCVQDDPNERPTMTEIVSYLNSSSGEVPLPQEPILSKSKKMDYMSYYHKTHSINDSINDLSVSTFLPR* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3385 694 CDD STKc_IRAK 381 647 - -
Ahy19g3385 694 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 299 687 - -
Ahy19g3385 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Ahy19g3385 694 SUPERFAMILY Protein kinase-like (PK-like) 360 675 IPR011009 -
Ahy19g3385 694 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 70 290 - -
Ahy19g3385 694 Gene3D Transferase(Phosphotransferase) domain 1 451 655 - -
Ahy19g3385 694 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Ahy19g3385 694 ProSiteProfiles Gnk2-homologous domain profile. 64 168 IPR002902 -
Ahy19g3385 694 ProSiteProfiles Protein kinase domain profile. 375 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3385 694 Gene3D - 181 284 IPR038408 -
Ahy19g3385 694 Gene3D - 64 168 IPR038408 -
Ahy19g3385 694 SMART serkin_6 375 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3385 694 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 299 687 - -
Ahy19g3385 694 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 70 290 - -
Ahy19g3385 694 Pfam Salt stress response/antifungal 69 164 IPR002902 -
Ahy19g3385 694 Pfam Salt stress response/antifungal 191 282 IPR002902 -
Ahy19g3385 694 Gene3D Phosphorylase Kinase; domain 1 345 450 - -
Ahy19g3385 694 ProSiteProfiles Gnk2-homologous domain profile. 174 284 IPR002902 -
Ahy19g3385 694 Pfam Protein kinase domain 376 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3385 Ahy-Chr19 156697732 156700680 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3385 46 657 Receptor kinase-like Gene Family AT4G05200 47.152 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy19g3385 Pkinase 9.80E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3385 - - adu:107467162 1302.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3385 19 156697732 156700680 Ahy9g2250 9 111463115 111466091 hybridization